Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05] 3,600 sequences; 37,342,230 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq3285 129 7e-25 seq538 113 6e-20 >seq3285 Length=63365 Score = 129 bits (142), Expect = 7e-25 Identities = 120/152 (79%), Gaps = 3/152 (2%) Strand=Plus/Minus Query 130072 ACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAA 130131 ||| |||||||| ||||||||||| |||||| |||| || || |||||||||||| Sbjct 18868 ACCAGGCATGAGCTGCCGCTTCTTCAGCCAGAAGATCGAGCAGAAAGAGCCAGAGAAGTG 18809 Query 130132 GATCCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATC 130191 ||| ||||||||||||||| | || | || ||||| |||||| ||| | | | || Sbjct 18808 GATGCCCTCCACACACGCGTAGGCGACAAGCCGCTCTGCAAAGCAGCTG---CTGCTCTC 18752 Query 130192 AAACCACTTCATCGCCCACTGCGCCTTTTTCT 130223 | |||||||||||||||||||||||| |||| Sbjct 18751 TATCCACTTCATCGCCCACTGCGCCTTCTTCT 18720 >seq538 Length=19016 Score = 113 bits (124), Expect = 6e-20 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| || || |||||||| || ||||| || || || ||| || || Sbjct 16869 GCAAAGTCTGTGTGCAGGCCTTCGTCACGAGAAATGAGCTCGTTTGAAAAGGTGAGGCCG 16810 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 |||||||| || |||||||| | |||||| || | || || ||||| ||||||||||| Sbjct 16809 GGCATGAGCCCTCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCGGAGAAGAAGATG 16750 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTC 130167 |||||||| || || ||||||| || ||||| Sbjct 16749 CCCTCCACGCAAGCAAACGCAATCAGGCGCTC 16718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618407370416000