Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05] 3,600 sequences; 37,342,230 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq161 100 9e-16 >seq161 Length=11266 Score = 100 bits (110), Expect = 9e-16 Identities = 134/185 (72%), Gaps = 1/185 (1%) Strand=Plus/Plus Query 349232 TGTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGA 349291 || |||| | | ||||| ||||||| || ||||| ||| |||| || || || ||| | Sbjct 2951 TGCGTTGGTCTGTGGCAGCATGATCGCGTGGAAATCATTCCAAACGAGCAGGGCAACCGC 3010 Query 349292 ACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATTGGTGATTCTGCAAAA 349351 || || || |||||||| ||||| ||||| || ||||| | ||||| ||| | || || Sbjct 3011 ACCACTCCCTCATACGTGGCATTCACCGACACCGAGCGCCTAATTGGCGATGCCGCCAAG 3070 Query 349352 AATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGGTAG- 349410 || || | || || || | || || ||||||||||| ||||| || || ||| | Sbjct 3071 AACCAGGTAGCGATGAACCCCATCAACACTGTTTTTGATGCAAAGCGGCTCATCGGTCGC 3130 Query 349411 AAGTT 349415 ||||| Sbjct 3131 AAGTT 3135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515184508890800