Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq3244 95.1 1e-14
seq3143 86.0 7e-12
seq3190 82.4 9e-11
>seq3244
Length=4747
Score = 95.1 bits (104), Expect = 1e-14
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 27493 ATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAA 27552
||||||||||| || || || || || || ||||||||||| || ||||| || |||||
Sbjct 3100 ATTCAGGACAAAGAAGGCATCCCCCCCGATCAGCAGCGTCTCATCTTTGCGGGCAAGCAG 3159
Query 27553 CTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTA 27612
|| ||||||| || || || || ||||| || |||| ||||| ||||| | || ||
Sbjct 3160 CTGGAGGATGGCCGCACGCTGGCCGACTACAACATCCAGAAGGAGTCCACCTTGCACCTG 3219
Query 27613 GTCTTGCGTCTTCGCGGTGG 27632
|| |||| || || || ||
Sbjct 3220 GTGCTGCGCCTGCGAGGAGG 3239
>seq3143
Length=13185
Score = 86.0 bits (94), Expect = 7e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567
|| || || || ||||||||||| || || ||||| || ||||| || ||||| | ||
Sbjct 6997 GGCATCCCCCCTGACCAGCAGCGCCTGATCTTTGCGGGCAAGCAGCTGGAGGACGGCCGC 7056
Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627
|| || || ||||| || |||| ||||| ||||| || || || || ||||| || |||
Sbjct 7057 ACACTGGCGGACTACAACATCCAGAAGGAGTCCACGCTGCACCTGGTGTTGCGCCTGCGC 7116
Query 27628 GGTGG 27632
|| ||
Sbjct 7117 GGAGG 7121
>seq3190
Length=33988
Score = 82.4 bits (90), Expect = 9e-11
Identities = 93/125 (74%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567
|| || || || ||||||||||| || || ||||| || ||||| || ||||||| ||
Sbjct 16928 GGCATCCCCCCTGACCAGCAGCGCCTGATCTTTGCGGGCAAGCAGCTTGAGGATGGCCGC 16987
Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627
|| || || || || || |||| ||||| ||||| || || || || |||| || ||
Sbjct 16988 ACGCTGGCTGATTACAACATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGCCTGCGA 17047
Query 27628 GGTGG 27632
|||||
Sbjct 17048 GGTGG 17052
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570284736032000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |