Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_028663.1
Length=188632
Score E
Sequences producing significant alignments: (Bits) Value
seq2029 338 8e-88
>seq2029
Length=64692
Score = 338 bits (374), Expect = 8e-88
Identities = 347/453 (77%), Gaps = 8/453 (2%)
Strand=Plus/Minus
Query 176635 AACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGTGGATCTCTT 176694
||||||||||||||||||||||||||||| || || || ||||| |||||||| || |
Sbjct 31300 AACATTCTAATGCACCCATTCCATATGCTAGGCGTTGCCGGTGTATTTGGTGGTTCATTA 31241
Query 176695 TTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCACTTGTTAGAGAGACAACCGAAAAC 176754
||||| || |||||||| ||||| |||||||| || || | || ||||| || |||
Sbjct 31240 TTCTCTGCTATGCACGGTTCACTTGTAACTTCTTCTCTAATTCGTGAAACAACTGAGAAC 31181
Query 176755 GAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACATACAACATTGTAGCT 176814
|||||| ||| | |||||||||||||| ||||||||||| || |||||||| || ||
Sbjct 31180 GAATCAGCTAACGAAGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCA 31121
Query 176815 GCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAATAACTCAAGAAGT 176874
|| || || ||||| |||||| | || ||||| || |||||||| || ||||| |
Sbjct 31120 GCTCATGGCTACTTCGGTCGTTTAATTTTCCAATACGCTTCTTTTAACAACTCTCGTTCA 31061
Query 176875 CTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTACTGCAATGGGTGTT 176934
| || |||||| | || || | ||||||||| | || ||||||||||| | ||| ||
Sbjct 31060 TTACATTTCTTCTTAGCTGCTTGGCCAGTTGTTGGTATTTGGTTTACTGCTTTAGGTATT 31001
Query 176935 TGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTAG----ACAA 176990
| || ||||| |||||| | || ||||||||||||||||| || || ||| ||||
Sbjct 31000 TCAACTATGGCTTTCAACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAA 30941
Query 176991 CTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAACCTTGGTATGGA 177050
|| || ||| || |||| || || | |||||||| ||||||||||||||
Sbjct 30940 ----GGCCGTGTTATTAACACTTGGGCTGACATTATCAACCGTGCCAACCTTGGTATGGA 30885
Query 177051 AGTTATGCACGAGCGTAATGCTCACAACTTCCC 177083
||| ||||| |||||||| ||||||||||||||
Sbjct 30884 AGTAATGCATGAGCGTAACGCTCACAACTTCCC 30852
Score = 336 bits (372), Expect = 3e-87
Identities = 389/524 (74%), Gaps = 0/524 (0%)
Strand=Plus/Minus
Query 176113 TTTTGCCAGTGGGTCACCAATACAAACAACAGAATTTACGTTGGTTGGTTTGGTGTGCTC 176172
||||| ||||||| || | || | ||| | | ||| | |||||||||||||| |
Sbjct 32746 TTTTGTGAGTGGGTTACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTATTA 32687
Query 176173 ATGATTCCATGTCTGCTCACTGCTGCAGCATGTTTTATCGTTGCATTTATTGCAGCACCA 176232
|||||||| | | | ||||| | || |||||| | || ||||| ||||||||
Sbjct 32686 ATGATTCCTACTTTATTAACTGCAACTTCAGTGTTTATCATCGCTTTTATCGCAGCACCT 32627
Query 176233 CCTGTCGATATCGACGGTATTCGCGAACCAGTAGCAGGATCTCTACTCTATGGAAACAAC 176292
||||| |||||||| ||||| || || ||||| | || || || | || |||||||||
Sbjct 32626 CCTGTTGATATCGATGGTATCCGTGAGCCAGTTTCTGGTTCACTTTTATACGGAAACAAC 32567
Query 176293 ATCATCTCAGGAGCAGTCGTCCCAAGCTCAAACGCAATCGGACTACACTTCTACCCAATC 176352
||||| || || || | | || | || ||||||||||| |||| |||||||| ||
Sbjct 32566 ATCATTTCTGGTGCTATTATTCCTACTTCTAACGCAATCGGTTTACATTTCTACCCTATT 32507
Query 176353 TGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGAGGACCATACCAACTCGTTGTA 176412
||||||||||| | ||||||||||| | ||||| || || || |||||||| | ||
Sbjct 32506 TGGGAAGCAGCTTCTCTTGACGAATGGTTATACAACGGTGGTCCTTACCAACTTATCGTT 32447
Query 176413 TTCCACTTCCTTATCGGTATCTCAGCTTACATGGGACGCCAATGGGAACTTAGTTACAGA 176472
| || ||| | | || |||| |||||||||| || | |||||| | || | |
Sbjct 32446 TGTCATTTCTTCTTAGGAATCTGTTCTTACATGGGTCGTGAGTGGGAATTATCTTTCCGT 32387
Query 176473 CTAGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCAGCGATGGCA 176532
|||| |||||||| ||||| ||||| ||||| |||||||| ||||||| | ||
Sbjct 32386 TTAGGTATGCGTCCATGGATTGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCAACAGCT 32327
Query 176533 GTTTTCCTCGTCTATCCATTCGGTCAAGGATCTTTCTCTGATGGTATGCCTCTTGGCATT 176592
|| ||| || |||| ||| |||||||||| ||||||||||||||||||||| | || |||
Sbjct 32326 GTATTCATCATCTACCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTATT 32267
Query 176593 TCAGGTACATTCAACTTTATGTTTGTATTCCAAGCAGAGCACAA 176636
|| |||||||| ||||| ||| | ||||||||||| ||||| ||
Sbjct 32266 TCTGGTACATTTAACTTCATGATCGTATTCCAAGCTGAGCATAA 32223
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 603467242752000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |