Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05] 3,600 sequences; 37,342,230 total letters Query= NC_031047.1 Length=170770 Score E Sequences producing significant alignments: (Bits) Value seq3559 86.0 7e-12 >seq3559 Length=35662 Score = 86.0 bits (94), Expect = 7e-12 Identities = 112/152 (74%), Gaps = 11/152 (7%) Strand=Plus/Minus Query 1051 AGGATTTGAACCTGCGACATTCTGCTCCCAAAGCAGACGCTCTACCAAACTGAGCTACAC 1110 ||||||||||||| |||||| || ||||||| || ||| ||||| ||| |||| || Sbjct 13461 AGGATTTGAACCTACGACATCTTGTTCCCAAAACAAGCGCGCTACCGGGCTGCGCTATAC 13402 Query 1111 GGAGTAAATTAAATTTGAGCGGATAATGAGAATCGAACTCACATCATCAGATTGGAAGTC 1170 | ||| || |||||||| |||||||||||||||||| | | ||||||| | Sbjct 13401 CCTGAAAA---AA----AGCGGATAGTGAGAATCGAACTCACATAGACTGCTTGGAAGGC 13349 Query 1171 TGAGGTAA--TACCATTATACGATATCCGCAA 1200 || || |||||||| | |||||||||| Sbjct 13348 --AGTAAATTTACCATTAATCTATATCCGCAA 13319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546311414880000