Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_031235.1
Length=194437
Score E
Sequences producing significant alignments: (Bits) Value
seq2029 576 2e-159
>seq2029
Length=64692
Score = 576 bits (638), Expect = 2e-159
Identities = 736/1014 (73%), Gaps = 0/1014 (0%)
Strand=Plus/Minus
Query 185960 GTTCGATGTCCTGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGG 186019
||| ||||| | |||||||||||| |||||||| || || ||||| || ||||| ||
Sbjct 63379 GTTTGATGTTGTTGATGACTGGCTTCGTCGCGACCGTTTCGTTTTTGTAGGATGGTCAGG 63320
Query 186020 ATTACTTCTTTTTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGCACAACGTT 186079
|||||| | || || ||||| ||| | ||| ||||||| ||| |||| || || || ||
Sbjct 63319 GTTACTTTTATTCCCGACTGCATATCTTGCACTTGGTGGTTGGTTTACAGGAACTACATT 63260
Query 186080 TGTTACGAGCTGGTATACCCACGGGTTGGCGTCTTCTTACCTTGAGGGTGCTAATTTTCT 186139
||| || |||||||| || || || || |||| || | || || |||||| |
Sbjct 63259 TGTAACTTCTTGGTATACTCATGGTTTAGCTACTTCATATTTAGAAGGCTGTAATTTCTT 63200
Query 186140 CACGGCAGCAGTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGG 186199
|| || || || || ||||| || | ||||||||||||| | | | ||||||||
Sbjct 63199 AACTGCTGCGGTTTCTACTCCAGCAAATAGTATGGGTCATTCTTTATTATTTCTTTGGGG 63140
Query 186200 TCCTGAGTCTCAAGGAGATATCATCCGCTGGTTCCAACTTGGGGGACTCTGGAATTTTGT 186259
|| || ||||||| ||| | | || |||| ||||||||| || || |||| ||| ||
Sbjct 63139 CCCAGAAGCTCAAGGTGATTTTACTCGTTGGTGCCAACTTGGAGGTCTTTGGACTTTCGT 63080
Query 186260 GGCGCTCCACGGAGCCTTTGCTCTCATAGGTTTCATGCTGCGACAGTTTGAAATCAGTCG 186319
|| || ||||| | ||| | || || ||||| ||||| || || |||||||| |||
Sbjct 63079 AGCCCTTCACGGTTCTTTTTCACTGATTGGTTTTATGCTTCGTCAATTTGAAATTGCTCG 63020
Query 186320 TCTCGTAGGTATCCGTCCATACAATGCCATTGCTTTTTCTGGTCCTATCGCTGTCTTTGT 186379
| ||| || |||||||| || || ||||||||||||| ||| || |||| || ||
Sbjct 63019 TTCAGTAAAAATTCGTCCATATAACGCGATTGCTTTTTCTGCTCCAATTTCTGTTTTCGT 62960
Query 186380 TAGTGTATTCCTCATCTACCCTCTTGGACAGTCCTCATGGTTCTTCGCTCCCTCCTTTGG 186439
| ||| ||||| || ||||| | || || || |||||||| || || |||||
Sbjct 62959 TTCTGTGTTCCTAATTTACCCATTAGGTCAATCAGGTTGGTTCTTTGCACCAAGTTTTGG 62900
Query 186440 AGTCGCAGCAATCTTTAGATTCCTGTTGTTCCTCCAAGGATTCCACAACTGGACGTTGAA 186499
|| || ||||| || | || | || || | ||||| ||||| |||||||| || ||
Sbjct 62899 TGTTGCGGCAATTTTCCGTTTTATCTTATTTTTTCAAGGCTTCCATAACTGGACTTTAAA 62840
Query 186500 TCCATTCCACATGATGGGTGTAGCAGGTATCCTTGGTGGTGCTCTGCTGTCAGCAATCCA 186559
|| ||||| |||||||||||||| ||| | || || | ||| | || | || || ||
Sbjct 62839 CCCTTTCCATATGATGGGTGTAGCTGGTGTACTAGGAGCTGCGTTACTTTGCGCCATTCA 62780
Query 186560 TGGTGTTACTGTAGAAAATACTCTTTATGAAGATGGCGAACAAGCAAACACATTCAAAGC 186619
||||| |||||||||||| || |||| ||||||||| || |||||||||||| ||
Sbjct 62779 TGGTGCTACTGTAGAAAACACACTTTTTGAAGATGGTGATGGTGCAAACACATTCCGTGC 62720
Query 186620 ATTCGATACGACGCAAGAAGAAGAAACCTATTCGATGGTCACTGCGAACAGATTCTGGTC 186679
|| | | || |||| ||||||||| || || ||||| ||||| |||||||| |||||
Sbjct 62719 GTTTAACCCAACTCAAGCAGAAGAAACATACTCTATGGTAACTGCTAACAGATTTTGGTC 62660
Query 186680 ACAGATCTTCGGAATTGCGTTTAGCAATAAGCGTTGGCTTCATTTCTTCATGCTCTTTGT 186739
|| ||||| || | || ||| ||||| |||||| | || ||||| ||||| |||||
Sbjct 62659 TCAAATCTTTGGTGTAGCTTTTTCTAATAAACGTTGGTTACACTTCTTTATGCTTTTTGT 62600
Query 186740 TCCTGTTATGGGTCTTTGGACCTCTTCCATTGGCATTATTGGTCTTGCTCTTAACCTTCG 186799
|||||| | || ||||||| | | ||||| | | ||||| ||| | ||| | ||
Sbjct 62599 TCCTGTAACAGGGCTTTGGATGAGTGCTATTGGTGTAGTAGGTCTAGCTTTAAACTTACG 62540
Query 186800 TGCTTATGACTTTGTAAGTCAGGAGGTGAGAGCAGCAGAGGATCCTGAGTTCGAGACGTT 186859
|||||| || || || || || | | || ||||| ||||| || || || || ||
Sbjct 62539 TGCTTACGATTTCGTTTCACAAGAAATTCGCGCTGCAGAAGATCCAGAATTTGAAACTTT 62480
Query 186860 CTATACCAAGAATATCCTATTGAATGAAGGTCTACGTGCCTGGATGGCACCAGTGGATCA 186919
||||||||| |||||||| || || |||||| | ||||| |||||||| | |||||
Sbjct 62479 CTATACCAAAAATATCCTTTTAAACGAAGGTATTCGTGCTTGGATGGCTGCTCAAGATCA 62420
Query 186920 ACCACATGAAAACTTTGTATTTCCTGAAGAAGTGTTGCCAAGAGGCAACGCTCT 186973
|| |||||||| ||||||| ||||| || || || ||| | || ||||||||
Sbjct 62419 GCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCACGTGGAAACGCTCT 62366
Score = 387 bits (428), Expect = 2e-102
Identities = 355/449 (79%), Gaps = 0/449 (0%)
Strand=Plus/Minus
Query 183718 AACATCCTGATGCACCCCTTCCACATGCTGGGTGTCGCTGGTGTCTTCGGTGGTTCTCTG 183777
||||| || |||||||| ||||| ||||| || || || ||||| || |||||||| |
Sbjct 31300 AACATTCTAATGCACCCATTCCATATGCTAGGCGTTGCCGGTGTATTTGGTGGTTCATTA 31241
Query 183778 TTCAGTGCAATGCACGGTTCTCTGGTTACTTCCTCGCTGGTTCGTGAAACCACTGAGTCT 183837
||| ||| ||||||||||| || || ||||| || || |||||||||| ||||||
Sbjct 31240 TTCTCTGCTATGCACGGTTCACTTGTAACTTCTTCTCTAATTCGTGAAACAACTGAGAAC 31181
Query 183838 GAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATTGTCGCT 183897
|| ||| ||| | |||||||| ||||||||||||||||| || |||||||| || ||
Sbjct 31180 GAATCAGCTAACGAAGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCA 31121
Query 183898 GCTCATGGATACTTTGGTCGTCTGATCTTCCAGTATGCTTCGTTTAACAATTCTCGTTCT 183957
|||||||| ||||| |||||| | || ||||| || ||||| |||||||| ||||||||
Sbjct 31120 GCTCATGGCTACTTCGGTCGTTTAATTTTCCAATACGCTTCTTTTAACAACTCTCGTTCA 31061
Query 183958 CTTCACTTCTTCCTTGCTGCTTGGCCAGTGGTCGGCATCTGGTTTACTGCTCTTGGTGTT 184017
| || |||||| | |||||||||||||| || || || |||||||||||| | ||| ||
Sbjct 31060 TTACATTTCTTCTTAGCTGCTTGGCCAGTTGTTGGTATTTGGTTTACTGCTTTAGGTATT 31001
Query 184018 AGCACTATGGCATTTAACCTGAATGGTTTTAACTTCAACCAGTCCATCATTGATGGTCAA 184077
|||||||| || ||| | |||||||| ||||||||||| || | | ||| |||
Sbjct 31000 TCAACTATGGCTTTCAACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAA 30941
Query 184078 GGTCGTGTCCTGAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTG 184137
|| ||||| | ||||| ||||| ||| || |||||||||| ||||| ||||||||
Sbjct 30940 GGCCGTGTTATTAACACTTGGGCTGACATTATCAACCGTGCCAACCTTGGTATGGAAGTA 30881
Query 184138 ATGCACGAGCGTAATGCTCACAACTTCCC 184166
||||| |||||||| ||||||||||||||
Sbjct 30880 ATGCATGAGCGTAACGCTCACAACTTCCC 30852
Score = 354 bits (392), Expect = 1e-92
Identities = 395/525 (75%), Gaps = 2/525 (0%)
Strand=Plus/Minus
Query 183196 TTCTGCGAATGGATTACCAGCACTAACAACCGCCTCTATGTGGGTTGGTTTGGCACACTG 183255
|| || || ||| |||| |||||| | ||||| | || | ||||||||||| | |
Sbjct 32746 TTTTGTGAGTGGGTTACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTATTA 32687
Query 183256 ATGATTCCAACTCTGTTGGCAGCAACCATCTGC-TTCATCGTTGCCTTCGTCGCTGCTCC 183314
|||||||| ||| | || | ||||| || | || ||| | || || |||| || ||
Sbjct 32686 ATGATTCCTACTTTATTAACTGCAACT-TCAGTGTTTATCATCGCTTTTATCGCAGCACC 32628
Query 183315 TCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACAA 183374
|||||| || ||||| || ||||| || || ||| |||| || || | || ||||||||
Sbjct 32627 TCCTGTTGATATCGATGGTATCCGTGAGCCAGTTTCTGGTTCACTTTTATACGGAAACAA 32568
Query 183375 CATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGACTTCACTTCTATCCCAT 183434
|||||| |||||||| || ||||| |||| |||||||| || | || ||||| || ||
Sbjct 32567 CATCATTTCTGGTGCTATTATTCCTACTTCTAACGCAATCGGTTTACATTTCTACCCTAT 32508
Query 183435 CTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTACCAACTCGTAGT 183494
||||||||||| || || || || ||| | || |||||||||||||||||||| | ||
Sbjct 32507 TTGGGAAGCAGCTTCTCTTGACGAATGGTTATACAACGGTGGTCCTTACCAACTTATCGT 32448
Query 183495 CTTCCACTTCCTCATTGGCGTCTTCTGCTACATGGGTCGTGAGTGGGAATTGTCTTACCG 183554
| || ||| || | || ||| | ||||||||||||||||||||||| |||| |||
Sbjct 32447 TTGTCATTTCTTCTTAGGAATCTGTTCTTACATGGGTCGTGAGTGGGAATTATCTTTCCG 32388
Query 183555 TCTCGGTATGCGTCCTTGGATCTGTGTTGCTTATAGCGCACCTGTTGCTGCTGCAACCGC 183614
| | ||||||||||| ||||| |||||||| ||||| |||||||| ||||| ||
Sbjct 32387 TTTAGGTATGCGTCCATGGATTGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCAACAGC 32328
Query 183615 TGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATGCCCCTGGGTAT 183674
||| ||| | |||| || |||||||||||||||| |||||||||||| | |||||
Sbjct 32327 TGTATTCATCATCTACCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTAT 32268
Query 183675 CAGTGGCACCTTTAACTATATGCTTGTCTTCCAAGCAGAGCACAA 183719
||| || ||||||| ||| | || |||||||| ||||| ||
Sbjct 32267 TTCTGGTACATTTAACTTCATGATCGTATTCCAAGCTGAGCATAA 32223
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622042406832000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |