Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20LA000219_20[genbank_20GCA_5F000812005.1_202015-01- 02] 106 sequences; 48,546,496 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq2 84.2 3e-11 >seq2 Length=534433 Score = 84.2 bits (92), Expect = 3e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 53705 GCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 53764 ||||| ||||||| ||| || || ||| ||| | |||| | || | | |||||| Sbjct 280806 GCAATTGATGCCAAATTGCATACAGCTGTCTCTTCAGCAGATGTGTACTCCACAATCTCA 280747 Query 53765 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 53824 ||||| ||||| || ||||||||||| || | ||| || ||||| ||| |||| || Sbjct 280746 GTGCAGAGATTGCTGCACTTGATGGTGCCCAGATTCTGCTGATTTGACTTCCTGTTGCAG 280687 Query 53825 GCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTG 53865 | ||||| || || ||| |||| | || || |||| ||| Sbjct 280686 GAGTCCTTGTAGAGCATGTATGGGTTGCCTGTCTCAACCTG 280646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593720813318880