Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20LA000219_20[genbank_20GCA_5F000812005.1_202015-01- 02] 106 sequences; 48,546,496 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq99 132 6e-26 >seq99 Length=2590953 Score = 132 bits (146), Expect = 6e-26 Identities = 167/227 (74%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 145878 CTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGC 145937 |||||||| ||| || ||||| ||||| |||||| | ||||| | || ||||||||||| Sbjct 1045562 CTGGCACATGAGATGACAGGGTGGCAGAGCCATGTCTGGCAGCGCGGCGGGGTTCCAGGC 1045503 Query 145938 GGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAG 145997 | | || || || | || | | |||||| | |||||| |||| || | | || Sbjct 1045502 GCTCAGCACCAGGCGCCGGTCGTTGGGGTTGCGCTTGATGGTGGCTATGAGCTGCGCCAG 1045443 Query 145998 CTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGA-GTCCACGTACGCGGCCCCGAAGT 146056 |||||| ||||||| || | ||| |||| | || | |||| |||| | ||||| |||| Sbjct 1045442 CTGGTCAACGCCCTTGCCGCTGTAGTCTG-CGTGCATGTCCGTGTACTCCGCCCCAAAGT 1045384 Query 146057 GCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTG 146103 | | |||||| |||||||| || ||||||| ||| || ||||||| Sbjct 1045383 GGCGCCACTGAAACCCGTACACTGGCCCCAAGTCACCAACCTCCCTG 1045337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076018148240