Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20LA000219_20[genbank_20GCA_5F000812005.1_202015-01- 02] 106 sequences; 48,546,496 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq89 84.2 5e-11 >seq89 Length=1719426 Score = 84.2 bits (92), Expect = 5e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 254253 GACGCGCAGTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGC 254312 ||||||||| ||| || | || ||||||||| ||||| | |||||||| || | Sbjct 905994 GACGCGCAGAACGCGCTGAGGCGGACGATGGAGGCGCACAGCAAGGTGACGCGCTTCATC 906053 Query 254313 CTGGTGTGCAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTT 254372 | | ||||||||||| ||| ||||||| ||| ||||| || || ||||||||||| Sbjct 906054 TTCATCTGCAACTACGTCTCGCGCATCATCGACCCCCTGGCCTCCCGCTGCGCCAAGTTC 906113 Query 254373 CGATTC 254378 || ||| Sbjct 906114 CGCTTC 906119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073764941691008