Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20LA000219_20[genbank_20GCA_5F000812005.1_202015-01- 02] 106 sequences; 48,546,496 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq4 89.7 4e-13 >seq4 Length=1187754 Score = 89.7 bits (98), Expect = 4e-13 Identities = 106/141 (75%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 33577 ATGGGCGACAAGTTTGC-ATCGTTCACGGCCCAGAAGGGCACGTGCGGCATGATGTACGA 33635 || || ||||||||||| | | || || | |||||||||| |||||||| ||| Sbjct 986771 ATTGGGGACAAGTTTGCCAGCCGGCATGGGC-AGAAGGGCACCATCGGCATGACATACAC 986713 Query 33636 CCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCGCA 33695 |||| |||||||| | || || || ||| | || || ||||| ||||||||||||| Sbjct 986712 CCAGGAAGACATGCCCTGGACAGCAGAGGGCATTGTGCCCGACCTCATCATCAACCCGCA 986653 Query 33696 TGCGTTCCCCTCGCGCATGAC 33716 ||| ||||||| |||||||| Sbjct 986652 TGCCATCCCCTCCCGCATGAC 986632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233139790718