Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20LA000219_20[genbank_20GCA_5F000812005.1_202015-01- 02] 106 sequences; 48,546,496 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq92 86.0 6e-12 >seq92 Length=1443051 Score = 86.0 bits (94), Expect = 6e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 5358 CCTCAAAGTCGCTGTTTCCGAAGTTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTT 5417 ||| ||||||| || | | ||| ||||| || || ||||| | |||| |||||| | Sbjct 489432 CCTGAAAGTCGACGTCGCTGTGGTTGAACAGGACTACTCCGACCTCCCCTCTGTAGTCCT 489373 Query 5418 CGTCGATAACGCCAGCGCCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTG 5477 |||| | ||||| ||||| |||||||||||| || || || |||||||| || || | Sbjct 489372 CGTCCACCACGCCCGCGCCTGTGTCGATAAAGTGCTTCACTGCCAGGCCGGAGCGCGGCG 489313 Query 5478 CTATGCG 5484 | ||||| Sbjct 489312 CAATGCG 489306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447749806730720