Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20LA000219_20[genbank_20GCA_5F000812005.1_202015-01- 02] 106 sequences; 48,546,496 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq4 104 3e-17 >seq4 Length=1187754 Score = 104 bits (114), Expect = 3e-17 Identities = 115/151 (76%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 15049 GCCCGAGATTGGCGACAAGTTTTGCT-CTGGTATGGCGCAAAAGGGCACGTGCGGCATGA 15107 |||| | ||||| ||||||||| | | || |||| ||| |||||||| |||||||| Sbjct 986778 GCCCCAAATTGGGGACAAGTTTGCCAGCCGGCATGG-GCAGAAGGGCACCATCGGCATGA 986720 Query 15108 TTTTCCCCCAGGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATCATCA 15167 | | |||||||||||||||||| || || ||||| ||||||| | ||||||| Sbjct 986719 CATACACCCAGGAAGACATGCCCTGGACAGCAGAGGGCATTGTGCCCGACCTCATCATCA 986660 Query 15168 ACCCCAACTGCATCCCGTCCCGCATGACCAT 15198 |||| | |||||| |||||||||||||| Sbjct 986659 ACCCGCATGCCATCCCCTCCCGCATGACCAT 986629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611391189905600