Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20LA000219_20[genbank_20GCA_5F000812005.1_202015-01- 02] 106 sequences; 48,546,496 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq20 161 2e-34 seq100 150 3e-31 seq99 150 3e-31 seq106 147 4e-30 seq87 131 3e-25 seq96 100 5e-16 seq102 96.9 6e-15 seq93 95.1 2e-14 seq33 95.1 2e-14 seq104 87.8 3e-12 seq98 86.0 1e-11 seq97 84.2 4e-11 >seq20 Length=132363 Score = 161 bits (178), Expect = 2e-34 Identities = 540/821 (66%), Gaps = 27/821 (3%) Strand=Plus/Minus Query 10005 AGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAG-TGCTGT 10063 || |||||||| || || || ||| || || | ||||||| | |||||| || | Sbjct 119930 AGGTCCATGAAATCGAACGGATTCCGCGCCCCGTAGAGCTTGGGATGACCGAGCTGGAG- 119872 Query 10064 GAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCATGCCAAT 10123 || | |||||| || ||||| |||| | | ||||||| | | ||||||||||| | Sbjct 119871 GAGGAGGCGGTCGGCGACGAATCGGATGAATTCGCTCATCTGTTTGGAGTTCATGCCGAG 119812 Query 10124 CATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGCTTCCTCGAC 10183 |||| |||||| |||| | ||| ||||| || | ||| ||||||| || ||||| | Sbjct 119811 CATGGCGCAGGGAATGGAGGAGCAGATGAACTCGGTCTCGATGGCGACAGCCTCCTCCAT 119752 Query 10184 GATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATACAGGAGCTCTCC 10243 ||||| | | | | || || ||| ||||| ||| | || ||||||| | | Sbjct 119751 GATGCGGTGGATCTCCTCGTCGGTCAGTTTGTTGACGACGTGAGAGTACAGGA----TGC 119696 Query 10244 AAAC-TGCT---GGTGGAGGCCCTCGTCGCG-GCTGATGAACTCGTTGGACAAACCCAGA 10298 | | |||| ||| |||||||||||||| ||| |||| |||||| || || Sbjct 119695 AGGCGTGCTCGGTGTGCAGGCCCTCGTCGCGCGCT-ATGAGGGAGTTGGAGAACGTGAGG 119637 Query 10299 CCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAACAGA 10358 || |||||| || ||||| |||||| | | |||||||| || ||||||| Sbjct 119636 CCCTTCATGAGATTGCGCTTGCGGAGCCAGTAGAGCGCGCAGAAACTGCCCGAGAACATG 119577 Query 10359 AGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAA---GGA---GCGGTCGCGC 10412 | ||||||||| | || ||| ||||||| ||||| ||| ||||||| || Sbjct 119576 ACGCCCTCCACGATGGCGAAGCAGACCAGGCGCTTGGCGAACGTGGAGTCGCGGTCG-GC 119518 Query 10413 GAAAAGTATTTCGAGGCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGATAGCC 10472 | | | ||| |||||||| |||||||| | | ||||| ||||| | || Sbjct 119517 G--ATCCACTTCTGCGCCCACGCGGCCTTCTTCTTGATGCATGGGATGGTCTCCACTGCG 119460 Query 10473 TCGAAGAGCTTGTTAC-GCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCAGGGAGTA 10531 | || || || | ||| | |||| || | | || ||||| | ||| || Sbjct 119459 T-TCAGGGCGTGGCGCTTCTCAGCGGGGTCCCGGATGAAGGTGTCCAGGAGTAAGGAATA 119401 Query 10532 TTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACATAC-GTGCCGAGG 10590 |||||||| | ||| || | ||||| | |||||||| | || | ||| || Sbjct 119400 GCTTTCGCTGTGTAGCGACTCTATGGCCGCCTGGAACGCGTAGAA-ACACTGCGCCTCGG 119342 Query 10591 GGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGCCAT-CGCTG 10649 || || |||| || | ||| | |||||||||| | || ||| | || | Sbjct 119341 GGACCTTGACCTCGTTCATGAAGCGATCCATCAGGTTCTCGTTGACGATGAAGTCCGAAG 119282 Query 10650 CCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCAGTTTTTCA 10709 || || |||||| | ||||||| ||||||||| |||||| | || |||| | Sbjct 119281 CC-GCGAAGAAGGCCAGGATGTTCTTGATGAACGTGCGCTCGTTCTCCGTCAGGCGGTGC 119223 Query 10710 CGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGTGGCAACG 10769 |||||| | || || ||||| | || ||| || ||||||||||| | || ||| Sbjct 119222 TCCCAGTCATCGACGTCGCTCTTGAGATCGATCTCGTCGACGGTCCAGAACGCGGACACG 119163 Query 10770 GCCTTCTTGTACATCTGGAAAATGTCGGGGTACCGGATGGG 10810 || ||||||| |||| | ||||| |||||| |||| || Sbjct 119162 GCTCTCTTGTAGATCTCCCAGATGTCCGGGTACTGGATCGG 119122 Score = 161 bits (178), Expect = 2e-34 Identities = 540/821 (66%), Gaps = 27/821 (3%) Strand=Plus/Minus Query 10005 AGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAG-TGCTGT 10063 || |||||||| || || || ||| || || | ||||||| | |||||| || | Sbjct 121842 AGGTCCATGAAATCGAACGGATTCCGCGCCCCGTAGAGCTTGGGATGACCGAGCTGGAG- 121784 Query 10064 GAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCATGCCAAT 10123 || | |||||| || ||||| |||| | | ||||||| | | ||||||||||| | Sbjct 121783 GAGGAGGCGGTCGGCGACGAATCGGATGAATTCGCTCATCTGTTTGGAGTTCATGCCGAG 121724 Query 10124 CATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGCTTCCTCGAC 10183 |||| |||||| |||| | ||| ||||| || | ||| ||||||| || ||||| | Sbjct 121723 CATGGCGCAGGGAATGGAGGAGCAGATGAACTCGGTCTCGATGGCGACAGCCTCCTCCAT 121664 Query 10184 GATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATACAGGAGCTCTCC 10243 ||||| | | | | || || ||| ||||| ||| | || ||||||| | | Sbjct 121663 GATGCGGTGGATCTCCTCGTCGGTCAGTTTGTTGACGACGTGAGAGTACAGGA----TGC 121608 Query 10244 AAAC-TGCT---GGTGGAGGCCCTCGTCGCG-GCTGATGAACTCGTTGGACAAACCCAGA 10298 | | |||| ||| |||||||||||||| ||| |||| |||||| || || Sbjct 121607 AGGCGTGCTCGGTGTGCAGGCCCTCGTCGCGCGCT-ATGAGGGAGTTGGAGAACGTGAGG 121549 Query 10299 CCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAACAGA 10358 || |||||| || ||||| |||||| | | |||||||| || ||||||| Sbjct 121548 CCCTTCATGAGATTGCGCTTGCGGAGCCAGTAGAGCGCGCAGAAACTGCCCGAGAACATG 121489 Query 10359 AGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAA---GGA---GCGGTCGCGC 10412 | ||||||||| | || ||| ||||||| ||||| ||| ||||||| || Sbjct 121488 ACGCCCTCCACGATGGCGAAGCAGACCAGGCGCTTGGCGAACGTGGAGTCGCGGTCG-GC 121430 Query 10413 GAAAAGTATTTCGAGGCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGATAGCC 10472 | | | ||| |||||||| |||||||| | | ||||| ||||| | || Sbjct 121429 G--ATCCACTTCTGCGCCCACGCGGCCTTCTTCTTGATGCATGGGATGGTCTCCACTGCG 121372 Query 10473 TCGAAGAGCTTGTTAC-GCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCAGGGAGTA 10531 | || || || | ||| | |||| || | | || ||||| | ||| || Sbjct 121371 T-TCAGGGCGTGGCGCTTCTCAGCGGGGTCCCGGATGAAGGTGTCCAGGAGTAAGGAATA 121313 Query 10532 TTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACATAC-GTGCCGAGG 10590 |||||||| | ||| || | ||||| | |||||||| | || | ||| || Sbjct 121312 GCTTTCGCTGTGTAGCGACTCTATGGCCGCCTGGAACGCGTAGAA-ACACTGCGCCTCGG 121254 Query 10591 GGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGCCAT-CGCTG 10649 || || |||| || | ||| | |||||||||| | || ||| | || | Sbjct 121253 GGACCTTGACCTCGTTCATGAAGCGATCCATCAGGTTCTCGTTGACGATGAAGTCCGAAG 121194 Query 10650 CCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCAGTTTTTCA 10709 || || |||||| | ||||||| ||||||||| |||||| | || |||| | Sbjct 121193 CC-GCGAAGAAGGCCAGGATGTTCTTGATGAACGTGCGCTCGTTCTCCGTCAGGCGGTGC 121135 Query 10710 CGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGTGGCAACG 10769 |||||| | || || ||||| | || ||| || ||||||||||| | || ||| Sbjct 121134 TCCCAGTCATCGACGTCGCTCTTGAGATCGATCTCGTCGACGGTCCAGAACGCGGACACG 121075 Query 10770 GCCTTCTTGTACATCTGGAAAATGTCGGGGTACCGGATGGG 10810 || ||||||| |||| | ||||| |||||| |||| || Sbjct 121074 GCTCTCTTGTAGATCTCCCAGATGTCCGGGTACTGGATCGG 121034 >seq100 Length=2336451 Score = 150 bits (166), Expect = 3e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || ||||||| |||| ||| || |||||||| || |||||||| || |||| Sbjct 980818 CCTCCACGCAGGCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 980759 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | ||||| || | |||||| ||||| || || || | || ||||| || || Sbjct 980758 AGTGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGAGGG 980699 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| ||| ||| |||||||||||| | || || || Sbjct 980698 ATGCCCTCCTTGTCCTGGATCTTGCTCTTCACGTTCTCGATGGTGTCAGAGGACTCCACC 980639 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTG 68447 |||| |||||||| || || || |||||| || Sbjct 980638 TCCAGTGTGATGGTCTTGCCAGTCAGGGTCCTG 980606 Score = 143 bits (158), Expect = 5e-29 Identities = 160/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293 ||| || || ||||||| |||| ||| || |||||||| || |||||||| || |||| Sbjct 982034 TCCACCACGCAGGCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 981975 Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353 || || | || || || | |||||| ||||| || || || | || ||||| || || Sbjct 981974 CAGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGG 981915 Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413 || || |||||||| || ||||| ||| ||| |||||||||||| | || || || Sbjct 981914 GATTCCCTCCTTGTCCTGGATCTTGCTCTTCACGTTCTCGATGGTGTCAGAGGACTCCAC 981855 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTG 68447 |||| ||||||||| || || ||||||||| || Sbjct 981854 CTCCAGGGTGATGGTCTTGCCAGTGAGGGTCCTG 981821 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||| ||| || |||||||| || |||||||| || |||| Sbjct 981220 CCACCACGCAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 981161 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| ||||| || || || | || ||||| || ||| Sbjct 981160 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGAGGA 981101 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| ||| ||| |||||||||||| | || || || Sbjct 981100 ATGCCCTCCTTGTCCTGGATCTTGCTCTTCACGTTCTCGATGGTGTCAGAGGACTCCACC 981041 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTG 68447 |||| |||||||| || || ||||| ||| || Sbjct 981040 TCCAGTGTGATGGTCTTGCCAGTGAGAGTCCTG 981008 Score = 136 bits (150), Expect = 7e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||| ||| || |||||||| || |||||||| || |||| Sbjct 981627 CCACCACGCAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 981568 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| ||||| || || || | || ||||| || || Sbjct 981567 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGAGGG 981508 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| ||| || |||||||||||| | || || || Sbjct 981507 ATTCCCTCCTTGTCCTGGATCTTGCTCTTCACATTCTCGATGGTGTCAGAGGACTCCACC 981448 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTG 68447 |||| ||||||||| || || ||||||||| || Sbjct 981447 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCCTG 981415 >seq99 Length=2590953 Score = 150 bits (166), Expect = 3e-31 Identities = 162/213 (76%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||||| |||| ||| || ||||||||| | |||||||||| |||| Sbjct 315586 CCACCGCGCAGGCGCAGCACCAGGTGGAGGATGGACTCTTCT-GGATGTTATAGTCGGCC 315528 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || | | | || |||| |||||| ||||| || || || | | ||||| || || Sbjct 315527 AGGGGGCGGCTGTCCTCTAGCTGCTTACCGGCAAAGATCAGGCGCTACTGGTCCGGGGGG 315468 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || | ||| | ||||||| |||||||||||| | ||| || || Sbjct 315467 ATGCCCTCCTTGTCCTGGACCTTGGACTTGACGTTCTCGATGGTGTCAGATGACTCCACC 315408 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTG 68447 |||||||||||||| || || ||||||||| || Sbjct 315407 TCCAAGGTGATGGTCTTGCCGGTGAGGGTCCTG 315375 Score = 107 bits (118), Expect = 4e-18 Identities = 67/72 (93%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 || ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1949063 GCTCGGGTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1949122 Query 84516 CCCACATCGGGC 84527 ||||| ||| || Sbjct 1949123 CCCACCTCGAGC 1949134 >seq106 Length=3132237 Score = 147 bits (162), Expect = 4e-30 Identities = 159/211 (75%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||||| |||| ||| || || ||||| || |||||||| || |||| Sbjct 2288914 CCACCACGCAGGCGCAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCC 2288973 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| |||||||| ||||| | || ||||| || ||| Sbjct 2288974 AGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGGGGA 2289033 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | |||||| ||||||||||| | || || || Sbjct 2289034 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTTTCGATGGTGTCAGAAGACTCCACC 2289093 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCT 68445 || | ||||||||| || || || || |||| Sbjct 2289094 TCAAGGGTGATGGTCTTGCCAGTCAGAGTCT 2289124 Score = 145 bits (160), Expect = 1e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||||| |||| ||| || |||||||| || |||||||| || |||| Sbjct 2288515 CCACCACGCAGGCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 2288574 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| ||||| || || || | || ||||| || || Sbjct 2288575 AGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGG 2288634 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||| ||| |||||||||||| | || || || Sbjct 2288635 ATGCCCTCCTTGTCCTGGATCTTGGACTTCACGTTCTCGATGGTGTCAGAGGACTCCACC 2288694 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTG 68447 |||| |||||||| || || ||||| ||| || Sbjct 2288695 TCCAGCGTGATGGTCTTGCCAGTGAGAGTCCTG 2288727 Score = 140 bits (154), Expect = 6e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 68226 TTTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTA 68285 ||| | || || || || ||||||| |||| ||| || |||||||| || |||||||| Sbjct 2288053 TTTCAGTTGCCACCACGCAGGCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTG 2288112 Query 68286 TAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGG 68345 || || | || || | ||||| || | |||||| ||||| || || || | || ||| Sbjct 2288113 TAGTCTGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGG 2288172 Query 68346 TCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT 68405 || || || ||||| |||||||| || ||||| | ||| ||| |||||||||||| | Sbjct 2288173 TCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCACGTTCTCGATGGTGTCAGAG 2288232 Query 68406 GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTG 68447 || || || |||| |||||||| || || || || ||| || Sbjct 2288233 GACTCCACCTCCAGCGTGATGGTCTTGCCAGTCAGAGTCCTG 2288274 Score = 96.9 bits (106), Expect = 6e-15 Identities = 110/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 10253 GTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCCAGACCGGGCATGAGCCC 10312 ||| |||||||||||||| ||||| ||||||||| || || |||||||||||| Sbjct 1547902 GTGCAGGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGCAG 1547961 Query 10313 CCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAACAGAAGACCCTCCACGCA 10372 || || |||||||| ||||||||||| || ||| ||| | | ||||||||||| Sbjct 1547962 GCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCGCTGAAGTGGATGCCCTCCACGCA 1548021 Query 10373 CACCCAGGCGACGAGGCGCTCTGCGAAG 10400 | | || || |||||||| || ||| Sbjct 1548022 GGCGAACGCCACCAGGCGCTCCGCAAAG 1548049 >seq87 Length=36794 Score = 131 bits (144), Expect = 3e-25 Identities = 343/519 (66%), Gaps = 66/519 (13%) Strand=Plus/Plus Query 93142 GGTCAGGGACAGGGTGGCGTTATCAATGCGCGAGAAGTTGCAAGTGCCGCTGGGCTGGCG 93201 ||||||| |||||||||||| || ||||| ||||||||||| || ||| ||||||| | Sbjct 17222 GGTCAGGTTCAGGGTGGCGTTGTCGATGCGGGAGAAGTTGCAGGTTCCGGAGGGCTGGTG 17281 Query 93202 ACCGGCAGGCTTGAGCGCGAAAGAGTACAGGTACACGCCGGCAGGGACCACGGAGCCCAC 93261 | | |||||||| |||| ||||||| || | ||| | ||||| || | Sbjct 17282 CTCCTCGGGCTTGAGTCCGAAGGAGTACACGTTGATGCC--CTTGGACCTGGG-GATGTT 17338 Query 93262 GGT------CTGGTAGGGCTGCACCTTGTTGAAGTAAGAGCCCTTGCGGCTGGAGAAACG 93315 ||| |||||||||||||||| ||||||||| |||||| || | ||| | Sbjct 17339 GGTGTGGTGCTGGTAGGGCTGCACCAGGTTGAAGTACGAGCCCAGACGCTCGTCGAACCT 17398 Query 93316 GTCCTGGCCGTTGAGCTGGATCTTGGCAGAGTCCAGGGGGGCCAGCTGCTCGTTGAAGGT 93375 ||| |||||||||||||| | |||| | ||| |||| | | ||| | | Sbjct 17399 GTCGTGGCCGTTGAGCTGCAGCTTGCCGCTCACCAAGGGG---------TTGATGATGTT 17449 Query 93376 GGCGGTGTTGGCAGTGTCACCAACGGTGGTGTTGGAGTTGACGCTGACGTTGGCCAGGGC 93435 | || |||| | || | |||| |||||| | || | || || ||| Sbjct 17450 GCCGAAGTTGTCCATGGCC---------GTGT---AGTTGAAGTTGTCATTCGC---GGC 17494 Query 93436 GGTGTAGCGGCCGTACGAGTTGTACGTGCCGGGGGTGAAGTTCCAGGCCAGGTACTTGGT 93495 || | | ||| ||| | || |||| || || | | || Sbjct 17495 AGTATTGA---CGTCAGAGACG-AC-TGCCC------AAATT-------AATTCTTTCAC 17536 Query 93496 GGGGTGGTTGAAGTTCATGCGGATGTTCTGGCTGGCCTGGGTGGTGGTGGAGATGGTGGC 93555 ||||||||||||||||| |||||| || | |||| || ||| |||| || Sbjct 17537 GGGGTGGTTGAAGTTCAGGCGGATCTTGT---TGGC----GTTCTGG--GAGACGGA--- 17584 Query 93556 AGTCTCGGAGCCGGTGAACTGCAGCTGCTCGATCAGGTACTCGTGGGGCAGCTGGGCGAA 93615 |||| |||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 17585 ---CTCGCCGCCGGTGAACTGCAGCTGCTCGATCAGGTACTCGTGGGAGACCTGGGCGAA 17641 Query 93616 GCGAGTGCGCTCCTGGGTGTCCAGGAAAATGTAGTCCAC 93654 | |||||| | |||||||||| | | ||||||||| Sbjct 17642 CCTGCGGCGCTCGTCGGTGTCCAGGTAGACGTAGTCCAC 17680 >seq96 Length=2254067 Score = 100 bits (110), Expect = 5e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 173318 CTCGAGCCAACAAACCCATATGCAGCAGCCAAGGCTGGTGCCGAAATGATGGCACGTGCA 173377 || ||||| |||||||| || ||||||| ||||| | || || ||||| || || Sbjct 1218721 CTGGAGCCGACAAACCCCTACTCAGCAGCAAAGGCGGCCGCAGAGATGATCGCCAAGGCC 1218780 Query 173378 TATCACACATCGTACAAGCTACCAGTCATCGTGACGCGCGGCAACAATGTGTATGGCCCG 173437 || || || |||| ||||||||| ||| ||| ||| ||||||| ||||| ||||| Sbjct 1218781 TACATGACCTCCTACAGGCTACCAGTGATCACGACTCGCAGCAACAACGTGTACGGCCCC 1218840 Query 173438 CATCAGTTCCCCGAAAAAATGATCCCAAAATTTATTCTTCGCGCAACCCGTGGCCTGGAC 173497 | ||||||||||| || ||||| || || | || | || | ||| | |||| Sbjct 1218841 AAGCAGTTCCCCGAGAAGCTGATCGGGAAGTTCACGCTGCTGGCCAGCCGCAACGAGGAC 1218900 Query 173498 CTCCCCATCCACGGGGACGG 173517 || |||||||| || || || Sbjct 1218901 CTTCCCATCCATGGAGATGG 1218920 >seq102 Length=2901463 Score = 96.9 bits (106), Expect = 6e-15 Identities = 137/192 (71%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 9996 AGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCG 10055 || || | ||||||||| |||| |||||||| || |||| | ||||| | || Sbjct 1634306 AGAGAGAGGAGCTCCATCCAGTCGAAGGGGTTGGGGGTGCCATAGTGCTTTTCTGAGCCC 1634247 Query 10056 AGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTC 10115 || || | | |||||| ||||| || ||||||||||||||||| |||||| |||| Sbjct 1634246 AGGGCGACCAGCAGGCGGTCGGCCACAAAGTCGATGTACTGGCTCATGAGGTCCTTGTTC 1634187 Query 10116 ATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGCT 10175 ||||| |||| || ||| | || ||||| | || ||||| ||| || | |||| Sbjct 1634186 ATGCCGATCAGGCCCACGGGCAGCGCCTCGCACAGAAACTCCTTCTCGATGTCAACCG-- 1634129 Query 10176 TCCTCGACGATG 10187 |||||| |||| Sbjct 1634128 -CCTCGATGATG 1634118 Score = 89.7 bits (98), Expect = 9e-13 Identities = 111/150 (74%), Gaps = 4/150 (3%) Strand=Plus/Minus Query 10253 GTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCCAGACCGGGCATGAGCCC 10312 ||||||||||||||||||| ||||| ||||||||| || || ||| ||||||| || Sbjct 1633770 GTGGAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGTGCATGAGGCC 1633711 Query 10313 CCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAACAGAAGA--CCCTCCACG 10370 || || |||||||| | | |||||| ||| ||| ||||| ||||||||| Sbjct 1633710 GCGCTTCTTGAGCCAGAAGACGCTGCAGAAGCTGCCGCTGAA--GAAGATGCCCTCCACG 1633653 Query 10371 CACACCCAGGCGACGAGGCGCTCTGCGAAG 10400 || |||| || || || ||||| || ||| Sbjct 1633652 CAGGCCCACGCCACCAGCCGCTCCGCAAAG 1633623 >seq93 Length=1853137 Score = 95.1 bits (104), Expect = 2e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 225865 CTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCG 225924 |||||| || |||||||| ||| |||||||| | || ||||| | ||||| Sbjct 1282257 CTTGCCGGCACCGTTGGGCCCGCACAGGCCGTAGCGGCGGCCCTTCTTGAGGCGCAGGCG 1282198 Query 225925 CGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTC 225984 ||| ||| || ||||||||| |||| ||||| |||||||| ||| ||||||||||| Sbjct 1282197 GGTGTTGTTGAGCAGGATCTTGGCACCGTAGGCCAGGGAGAAGGTGCAGTCGCACAGGTC 1282138 Query 225985 CTCACCCTCCTC 225996 ||| |||||||| Sbjct 1282137 CTCGCCCTCCTC 1282126 Score = 93.3 bits (102), Expect = 8e-14 Identities = 109/146 (75%), Gaps = 1/146 (1%) Strand=Plus/Minus Query 225022 CTCAATATGGTGGAAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCA 225081 |||||| |||||||| || ||||| || ||||| || | |||||||||||| || ||| Sbjct 1283987 CTCAATGTGGTGGAAGGCGTGCTGCGCCACGTAGGCGACGCGCATGTTGGGGTGGCGCCA 1283928 Query 225082 CACAGAGCCCCGAGTCGGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCC 225141 ||| | || | || | ||| |||||||| |||||||| | || | |||||| Sbjct 1283927 CACGGTTCCGTAGGAGGGCTCCAGCTCACCGGTGAGCACCTTGATCATGGTGGACTTGCC 1283868 Query 225142 CGCACCATTGGGGCCAATCAC-GCCA 225166 |||||||||||||| | ||| |||| Sbjct 1283867 AGCACCATTGGGGCCCAGCACAGCCA 1283842 Score = 89.7 bits (98), Expect = 9e-13 Identities = 122/170 (72%), Gaps = 3/170 (2%) Strand=Plus/Minus Query 225401 AGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGCGTCAAGGAAGCCAGAG 225460 |||||| |||||| | || || ||||| | | ||| || ||| |||||| ||| Sbjct 1283101 AGCTTGCGGTTCT---CATAGTGGACAATGGACTGGCAGACGTTGTCCAGGAAGGTGGAG 1283045 Query 225461 TCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAGGTGCGTGATGAGCCAT 225520 ||||||||||| |||| || | || | |||||||| | |||| ||| | ||| Sbjct 1283044 TCGTGGGACACGATGACAGAGGTGACCTCAGTCAGGCCAGTCAGGTAGTTGACCAACCAG 1282985 Query 225521 GCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGAT 225570 |||||||| ||||||||| ||||| || || || ||||| |||| ||| Sbjct 1282984 GCCACGTTCTTGACGTCCAGATGGTTGGTGGGCTCATCCAGGAGCATGAT 1282935 Score = 84.2 bits (92), Expect = 4e-11 Identities = 118/166 (71%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 224442 CAGTGCTGTGAGAAATAACTACTACACCGCCGCCGAATGACTCAAGGGCGGATGAAAGCG 224501 ||| | |||| ||||| | || |||||||||||||| || | ||| | || | Sbjct 1285461 CAGAGTTGTGGGAAATCATGACGACACCGCCGCCGAACTCCTTGATGGCCTCGGCCAGGG 1285402 Query 224502 CGCCAAGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGC 224561 |||| || ||||||||||| ||| |||| | ||||||||||| | | | ||||||| Sbjct 1285401 CGCCCAGGGACTCGCGGTCCAGGTAGTTACTGGGCTCATCCAGCACCAGCATGTGGGGGT 1285342 Query 224562 ACTGCCACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCC 224607 | ||| ||| || | | ||||| |||||||||||| || || Sbjct 1285341 TCATCCAGGTGGCGGCCGCCAGCACCACCTTCACCTTCTGGCCACC 1285296 >seq33 Length=59379 Score = 95.1 bits (104), Expect = 2e-14 Identities = 135/187 (72%), Gaps = 10/187 (5%) Strand=Plus/Plus Query 94079 ATCAGGTCACCGTTACGGGAGATCTGGGTGC---TGACCTTGTTGCCGAAGCCAACGGAA 94135 |||||||||||||| | || ||| |||| | ||| | ||||| ||| | |||| Sbjct 8538 ATCAGGTCACCGTTCCTGGCTATC---GTGCACGTCACCCTCTTGCCAAAGTC--CGGAT 8592 Query 94136 --CCGTTGATGGTCTGCTGAATGGACTCAACGGCGAAGTTGGTGTAGCGGCGGTACACGG 94193 || || |||||| | ||| ||| | |||||| || ||||| | |||||||||| Sbjct 8593 TTCCCGAGAAGGTCTGTGGTATGCTCTCGATGGCGAAATTCGTGTACCTGCGGTACACGA 8652 Query 94194 TCTTGAAGAAAGTAATCTGGGGGTTGCCAGTCAGGTACACGTCCTGGGCACCATAGGCGA 94253 ||| | | || ||||||||||| || |||||||| | ||||| || ||||| |||| Sbjct 8653 GCTTCCACCACGTGATCTGGGGGTTTCCTGTCAGGTAGAGATCCTGTGCCCCATAAGCGA 8712 Query 94254 CGAGCTG 94260 |||| || Sbjct 8713 CGAGTTG 8719 >seq104 Length=3762872 Score = 87.8 bits (96), Expect = 3e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 173527 GCGGTCGTATTTGTATGTTGATGACGTGGCAGAGGCTTACATTACTATTTTGCTCAAGGG 173586 |||||| || ||||||| || |||||||| ||||| | | || ||| |||||| Sbjct 599549 GCGGTCATACCTGTATGTGGAGGACGTGGCGGAGGCCTTCGAGGTGATCCTGCGCAAGGG 599608 Query 173587 CAATGTCGGGGAAACGTACAACATTGGCACACAGAAGGAGCGCAGTGTTGTAGATGTTGC 173646 || |||||||| || |||||||| ||||| ||||||||||||| || | || || || Sbjct 599609 CACGGTCGGGGAGACCTACAACATCGGCACGCAGAAGGAGCGCACCGTCATGGACGTCGC 599668 Query 173647 GCA 173649 ||| Sbjct 599669 GCA 599671 >seq98 Length=1748987 Score = 86.0 bits (94), Expect = 1e-11 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 268211 CCAGTTGCAATCACAAAGTCCTCTGGCTCAGGAGACTGGAGCATTTTCCACATTGCTTCG 268270 ||||| | || |||||||| || ||||| ||| ||||| |||||| | Sbjct 1547495 CCAGTGCCGATGACAAAGTCGTCGGGCTCCTCCTGCTGCAGCATGAGCCACATGCAGTAC 1547436 Query 268271 ACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGGCAT 268330 ||||||||||| ||||| ||||| |||||||| ||||||| |||||| | | |||||| Sbjct 1547435 ACATAGTCCCGGGCATGCCCCCAGTCGCGCTTCGCGTCCAGGTTCCCCAACAGCAGGCAC 1547376 Query 268331 TTCTGCTTGCCGAGC 268345 | |||| |||| ||| Sbjct 1547375 TCCTGCGTGCCAAGC 1547361 >seq97 Length=2139879 Score = 84.2 bits (92), Expect = 4e-11 Identities = 104/140 (74%), Gaps = 2/140 (1%) Strand=Plus/Minus Query 173127 CGCAGACCCATGTGGACAACTCGTTCGGTAACTCGCTGGCATTTACCATGAACAACGTCT 173186 |||||||||||||||||||||| || || ||| |||| || |||||||||||| | Sbjct 1734776 CGCAGACCCATGTGGACAACTCCTTTGGCAACAGTTTGGCCTTCACCATGAACAACACGT 1734717 Query 173187 ACGGGACCCACGTTCTCCTGGAATGCGCGAGGC-TCTATGGCGGTGTCCAGCGGTTCATC 173245 | || || ||||| ||||||||| || | || | ||||| || ||| ||||| || Sbjct 1734716 ATGGCACACACGTGCTCCTGGAA-GCCTGCCGCGTGTATGGAGGCATCCGCCGGTTTATA 1734658 Query 173246 AATGTGTCTACCGACGAAGT 173265 ||| || || ||||| || Sbjct 1734657 GCTGTCTCCACAGACGAGGT 1734638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621178850320