Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20LA000219_20[genbank_20GCA_5F000812005.1_202015-01- 02] 106 sequences; 48,546,496 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq33 84.2 5e-11 >seq33 Length=59379 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 222537 TCGATGGCGAAGTTGGTGTAACGACGGTACACGGTCTTGAAGAAGGTGATCTGAGGGTTA 222596 ||||||||||| || ||||| | ||||||||| ||| | | |||||||| ||||| Sbjct 8619 TCGATGGCGAAATTCGTGTACCTGCGGTACACGAGCTTCCACCACGTGATCTGGGGGTTT 8678 Query 222597 CCGGTCAGGTACACGTCCTGAGCGCCGTACGCGACGAGTTG 222637 || |||||||| | ||||| || || || ||||||||||| Sbjct 8679 CCTGTCAGGTAGAGATCCTGTGCCCCATAAGCGACGAGTTG 8719 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 232551 TCGATGGCGAAGTTGGTGTAACGACGGTACACGGTCTTGAAGAAGGTGATTTGGGGGTTG 232610 ||||||||||| || ||||| | ||||||||| ||| | | ||||| |||||||| Sbjct 8619 TCGATGGCGAAATTCGTGTACCTGCGGTACACGAGCTTCCACCACGTGATCTGGGGGTTT 8678 Query 232611 CCGGTCAGGTACACGTCCTGAGCGCCGTACGCGACGAGTTG 232651 || |||||||| | ||||| || || || ||||||||||| Sbjct 8679 CCTGTCAGGTAGAGATCCTGTGCCCCATAAGCGACGAGTTG 8719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102878502151100