Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20LA000219_20[genbank_20GCA_5F000812005.1_202015-01- 02] 106 sequences; 48,546,496 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq102 129 9e-25 >seq102 Length=2901463 Score = 129 bits (142), Expect = 9e-25 Identities = 132/170 (78%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 159915 ACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACA 159974 |||||||||| || ||||||||||| || |||||||| || ||||||| ||||||||| | Sbjct 1633792 ACAGGAGGCAGGCGAAGTCGCAGTGGAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGA 1633733 Query 159975 TGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGC-ACCG 160033 | ||||||| |||||| || ||| |||||||| || | || ||| |||| ||| Sbjct 1633732 AGGTGAGGCCGTGCATGAGGCCGCGCTTCTTGAGCCAGAAGA-CGCTGCAGAAGCTGCCG 1633674 Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAA 160083 || || ||||| ||||||||| || ||||||| |||| ||| |||| Sbjct 1633673 CTGAAGAAGATGCCCTCCACGCAGGCCCACGCCACCAGCCGCTCCGCAAA 1633624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154146419360