Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20LA000219_20[genbank_20GCA_5F000812005.1_202015-01- 02] 106 sequences; 48,546,496 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq2 100 3e-16 >seq2 Length=534433 Score = 100 bits (110), Expect = 3e-16 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 106448 ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG 106507 ||||| ||| || || ||||||||||||||||| ||||| ||||| || | |||| Sbjct 280821 ACATATCGTGGGAGAGCAATTGATGCCAAATTGCATACAGCTGTCTCTTCAGCAGATGTG 280762 Query 106508 TACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTA 106567 ||||| | ||| || || || | ||| | ||| || || |||| ||||| || || Sbjct 280761 TACTCCACAATCTCAGTGCAGAGATTGCTGCACTTGATGGTGCCCAGATTCTGCTGATTT 280702 Query 106568 CTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTC 106617 ||| ||||||| | ||||||||||||||||| || | || ||||| Sbjct 280701 GACTTCCTGTTGCAGGAGTCCTTGTAGAGCATGTATGGGTTGCCTGTCTC 280652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980018275440