Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20LA000219_20[genbank_20GCA_5F000812005.1_202015-01- 02] 106 sequences; 48,546,496 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq106 82.4 5e-11 >seq106 Length=3132237 Score = 82.4 bits (90), Expect = 5e-11 Identities = 125/178 (70%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || |||| |||||||| || ||||| || Sbjct 2288950 TCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAG 2289009 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||||||| | || | ||||||||||| ||||| ||||| | Sbjct 2289010 ATGAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTT 2289069 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 | || | ||| | ||| || || | ||| ||||| || || || ||||||| || Sbjct 2289070 TCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTGCA 2289127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633180613968