Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20LA000219_20[genbank_20GCA_5F000812005.1_202015-01- 02] 106 sequences; 48,546,496 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2 113 5e-20 >seq2 Length=534433 Score = 113 bits (124), Expect = 5e-20 Identities = 127/170 (75%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 75905 GAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAG 75964 ||||| || | ||||| ||||| |||||||| | || |||| |||| || || || Sbjct 280652 GAGACAGGCAACCCATACATGCTCTACAAGGACTCCTGCAACAGGAAGTCAAATCAGCAG 280711 Query 75965 AATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAG 76024 ||| |||| || |||||| || ||||| ||||| || ||| | ||||||||| | Sbjct 280712 AATCTGGGCACCATCAAGTGCAGCAATCTCTGCACTGAGATTGTGGAGTACACATCTGCT 280771 Query 76025 GATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGT 76074 || ||||| ||||| ||||||||||||||||| || || ||| ||||| Sbjct 280772 GAAGAGACAGCTGTATGCAATTTGGCATCAATTGCTCTCCCACGATATGT 280821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568809545280