Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20LA000219_20[genbank_20GCA_5F000812005.1_202015-01- 02] 106 sequences; 48,546,496 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq106 105 2e-17 >seq106 Length=3132237 Score = 105 bits (116), Expect = 2e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 206188 ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTA 206247 || || || || || || ||||| | || ||||| ||||||||| ||||| || Sbjct 2289122 ACTCTGACTGGCAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACCATCGAAAATGTC 2289063 Query 206248 AAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCC 206307 ||| ||||| || || || || || ||| || ||| || | || ||||||||| Sbjct 2289062 AAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGCCTCATCTTCGCC 2289003 Query 206308 GGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACT 206367 || |||||| |||| ||||| | || ||||||| |||||| ||||||| |||||||| Sbjct 2289002 GGCAAGCAGCTGGAGGATGGCCGCACCCTGGCCGACTACAACATCCAGAAGGAGTCTACC 2288943 Query 206368 CTTCACCTTGT 206378 || ||||| || Sbjct 2288942 CTCCACCTGGT 2288932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181819194939626