Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20LA000219_20[genbank_20GCA_5F000812005.1_202015-01- 02] 106 sequences; 48,546,496 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq99 123 3e-23 >seq99 Length=2590953 Score = 123 bits (136), Expect = 3e-23 Identities = 161/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 147111 AAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCA 147170 || |||||||| || || || || ||||| |||||| | ||||| | ||||||||||| Sbjct 1045565 AACCTGGCACATGAGATGACAGGGTGGCAGAGCCATGTCTGGCAGCGCGGCGGGGTTCCA 1045506 Query 147171 GGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCT 147230 ||| | |||||| |||| | | |||||| | ||| || | || | | | Sbjct 1045505 GGCGCTCAGCACCAGGCGCCGGTCGTTGGGGTTGCGCTTGATGGTGGCTATGAGCTGCGC 1045446 Query 147231 CAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCA-GTCCACGTACCTGGCCCCAA 147289 ||||||||| ||||||| ||| | ||||| || | ||| |||| |||| ||||||| Sbjct 1045445 CAGCTGGTCAACGCCCTTGCCGCTGTAGTCTG-CGTGCATGTCCGTGTACTCCGCCCCAA 1045387 Query 147290 AGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCC 147329 |||| | |||||| || |||||||||||||||| ||| || Sbjct 1045386 AGTGGCGCCACTGAAACCCGTACACTGGCCCCAAGTCACC 1045347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487226878400