Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20LA000219_20[genbank_20GCA_5F000812005.1_202015-01- 02] 106 sequences; 48,546,496 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq106 114 2e-20 seq102 105 8e-18 >seq106 Length=3132237 Score = 114 bits (126), Expect = 2e-20 Identities = 114/148 (77%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 94797 CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 94856 |||||| ||||| || | || || || || || ||||| ||| |||| || ||||| Sbjct 1548049 CTTTGCGGAGCGCCTGGTGGCGTTCGCCTGCGTGGAGGGCATCCACTTCAGCGGCTCCTT 1547990 Query 94857 CTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 94916 |||||| || | |||||||||||||| |||||||| || ||| |||||||||||| Sbjct 1547989 CTGCGCCATCTTCTGGCTCAAGAAGCGCCTGCTCATGCCCGGCCTCACCTTCTCCAACGA 1547930 Query 94917 GCTTATCTCTCGTGACGAGGGACTCCAC 94944 ||| ||||| || |||||||| || ||| Sbjct 1547929 GCTCATCTCGCGCGACGAGGGCCTGCAC 1547902 >seq102 Length=2901463 Score = 105 bits (116), Expect = 8e-18 Identities = 112/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 94797 CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 94856 |||||| ||||| || | || | || || || ||||| ||||||||| || ||| Sbjct 1633623 CTTTGCGGAGCGGCTGGTGGCGTGGGCCTGCGTGGAGGGCATCTTCTTCAGCGGCAGCTT 1633682 Query 94857 CTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 94916 |||| | | |||||||||||||| || ||||||| || ||| |||||||||||| Sbjct 1633683 CTGCAGCGTCTTCTGGCTCAAGAAGCGCGGCCTCATGCACGGCCTCACCTTCTCCAACGA 1633742 Query 94917 GCTTATCTCTCGTGACGAGGGACTCCAC 94944 ||| ||||| || |||||||| |||||| Sbjct 1633743 GCTCATCTCCCGCGACGAGGGCCTCCAC 1633770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260027179440