Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20LA000219_20[genbank_20GCA_5F000812005.1_202015-01- 02] 106 sequences; 48,546,496 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq99 86.0 6e-12 >seq99 Length=2590953 Score = 86.0 bits (94), Expect = 6e-12 Identities = 124/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 34386 GGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGT 34445 |||||| || |||||||| || || |||||||| |||||| | |||||||||||||||| Sbjct 1045339 GGGAGGTTGGTGACTTGGGGCCAGTGTACGGGTTTCAGTGGCGCCACTTTGGGGCGGAGT 1045398 Query 34446 ATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCG 34505 | || | | || ||||| || |||| | ||||||||| | | | || | Sbjct 1045399 ACACGGACATGCACGCAGACTACAGCGGCAAGGGCGTTGACCAGCTGGCGCAGCTCATAG 1045458 Query 34506 ACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCC 34560 |||| | ||||| ||||| | ||| | | | ||| || |||| |||||||| Sbjct 1045459 CCACCATCAAGCGCAACCCCAACGACCGGCGCCTGGTGCTGAGCGCCTGGAACCC 1045513 Score = 86.0 bits (94), Expect = 6e-12 Identities = 124/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 6785 GGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATC 6844 |||||||| |||| || ||| | | | ||| | ||||| ||||| | |||| | || Sbjct 1045513 GGGTTCCAGGCGCTCAGCACCAGGCGCCGGTCGTTGGGGTTGCGCTTGATGGTGGCTATG 1045454 Query 6845 ACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCC 6904 | | | ||||||||| | |||| || ||||| || | | || |||||| Sbjct 1045453 AGCTGCGCCAGCTGGTCAACGCCCTTGCCGCTGTAGTCTGCGTGCATGTCCGTGTACTCC 1045394 Query 6905 GCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCC 6959 ||||||||||| | |||||| |||||||| || || |||||||| || |||||| Sbjct 1045393 GCCCCAAAGTGGCGCCACTGAAACCCGTACACTGGCCCCAAGTCACCAACCTCCC 1045339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448261806052320