Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20SUA001_20[genbank_20GCA_5F001244535.1_202015-08- 05] 23,591 sequences; 11,754,406 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq2916 107 5e-18 >seq2916 Length=312 Score = 107 bits (118), Expect = 5e-18 Identities = 83/99 (84%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 199421 ACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCC 199480 || |||||||| || |||||||| |||| ||| |||||||||| || | ||||| ||| Sbjct 111 ACCAGGTGGAGGGTAGACTCCTTCTGGATGTTATAGTCAGCCAGGGTGCGACCATCCTCC 52 Query 199481 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 199519 |||||||| ||||| |||||||| ||||||||||| ||| Sbjct 51 AGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCAGGA 13 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178565259525597