Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20SUA001_20[genbank_20GCA_5F001244535.1_202015-08- 05] 23,591 sequences; 11,754,406 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq2916 87.8 2e-12 >seq2916 Length=312 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || | | |||||||||||| || | ||| |||||| ||||| || ||||| | Sbjct 131 TGCCACCGCGCAGACGCAACACCAGGTGGAGGGTAGACTCCTTCTGGATGTTATAGTCAG 72 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 || ||||| | || || |||||||||||||| || || | |||||||||||| | | Sbjct 71 CCAGGGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCAGGAG 12 Query 46485 GCACGCTCTCC 46495 | | || |||| Sbjct 11 GGATGCCCTCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565071718261320