Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20SUA001_20[genbank_20GCA_5F001244535.1_202015-08- 05] 23,591 sequences; 11,754,406 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq22882 129 7e-25 >seq22882 Length=217 Score = 129 bits (142), Expect = 7e-25 Identities = 124/159 (78%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 102173 CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 102232 |||||| ||||| || | ||||||||||| || ||||| ||| ||| ||| ||||| Sbjct 44 CTTTGCCGAGCGGCTGGTTGCATTTGCGTGCGTGGAGGGCATCCACTTTAGTGGCTCCTT 103 Query 102233 CTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 102292 ||||||||| | ||||| |||||||| |||||||| || ||| |||||||||||| Sbjct 104 CTGCGCTATCTTCTGGCTGAAGAAGCGGCTGCTCATGCCGGGGCTCACCTTCTCCAACGA 163 Query 102293 GCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||| ||||| || |||||||| || ||| || ||||| Sbjct 164 GCTCATCTCCCGCGACGAGGGCCTTCACACCGACTTTGC 202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620559350825520