Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20SUA001_20[genbank_20GCA_5F001244535.1_202015-08- 05] 23,591 sequences; 11,754,406 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq22882 107 4e-18 >seq22882 Length=217 Score = 107 bits (118), Expect = 4e-18 Identities = 109/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 48120 CATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGG 48179 ||||||| | |||||||||||| |||| | ||| ||||| ||| ||||||| |||||| Sbjct 216 CATAGAGGAGGCAGGCAAAGTCGGTGTGAAGGCCCTCGTCGCGGGAGATGAGCTCGTTGG 157 Query 48180 AGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGC 48239 ||||| ||| || ||||||| | || || || |||||||| || || ||| |||| Sbjct 156 AGAAGGTGAGCCCCGGCATGAGCAGCCGCTTCTTCAGCCAGAAGATAGCGCAGAAGGAGC 97 Query 48240 CAGAGAAGAAGATGCCCTCCAC 48261 || ||| |||||||||||| Sbjct 96 CACTAAAGTGGATGCCCTCCAC 75 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931258102621440