Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20SUA001_20[genbank_20GCA_5F001244535.1_202015-08- 05] 23,591 sequences; 11,754,406 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq22882 125 1e-23 >seq22882 Length=217 Score = 125 bits (138), Expect = 1e-23 Identities = 134/172 (78%), Gaps = 4/172 (2%) Strand=Plus/Plus Query 25870 TTTGGCGAGCGGCTGGTAGCCTTTGC-TGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT 25928 |||| |||||||||||| || ||||| ||| |||||||||||| || || || || || Sbjct 45 TTTGCCGAGCGGCTGGTTGCATTTGCGTGC-GTGGAGGGCATCCACTTTAGTGGCTCCTT 103 Query 25929 -TGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACG 25987 ||| || ||||||||||| ||| || | | |||||| ||||| ||| ||||||| Sbjct 104 CTGC-GCTATCTTCTGGCTGAAGAAGCGGCTGCTCATGCCGGGGCTCACCTTCTCCAACG 162 Query 25988 AGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTA 26039 |||||||| | | |||||||| || |||| || ||||||||||| ||||| Sbjct 163 AGCTCATCTCCCGCGACGAGGGCCTTCACACCGACTTTGCCTGCCTCCTCTA 214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928570895279040