Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20SUA001_20[genbank_20GCA_5F001244535.1_202015-08- 05] 23,591 sequences; 11,754,406 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq2916 89.7 7e-13 >seq2916 Length=312 Score = 89.7 bits (98), Expect = 7e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 171960 GGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGG 172019 ||| ||||| || || || ||||| || || || ||||| || || ||||| || ||||| Sbjct 1 GGAGGGCATCCCTCCTGACCAGCAGCGCCTCATCTTTGCCGGCAAGCAGCTGGAGGATGG 60 Query 172020 ACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCT 172079 || ||||| ||||| || ||| | || ||||||||||| || ||||| || | | || Sbjct 61 TCGCACCCTGGCTGACTATAACATCCAGAAGGAGTCTACCCTCCACCTGGTGTTGCGTCT 120 Query 172080 TCGGGGTGG 172088 || ||||| Sbjct 121 GCGCGGTGG 129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657668404601520