Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20SUA001_20[genbank_20GCA_5F001244535.1_202015-08- 05] 23,591 sequences; 11,754,406 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq22882 95.1 1e-14 >seq22882 Length=217 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/211 (71%), Gaps = 7/211 (3%) Strand=Plus/Minus Query 120640 AGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTC 120699 ||||| |||||||| ||||| |||||||||||||| || || ||||||||| || || Sbjct 208 AGGCAGGCAAAGTCGGTGTGAAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTG 149 Query 120700 AGGCCGGGCATGA--TGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAA 120757 || || ||||||| ||| | |||| | |||| || ||| ||| ||| || Sbjct 148 AGCCCCGGCATGAGCAGCC--GCTTCTTCAGCCAGAAGATAGCGCAGAAGGAGCCACTAA 91 Query 120758 AGAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGC 120817 || | |||||||||| ||||| || |||| ||||||| ||| | || | | | Sbjct 90 AGTGGATGCCCTCCACGCACGCAAATGCAACCAGCCGCTCGG-CAAAGCTGCTGCC--AC 34 Query 120818 TGTCGATCCACTTCATGGCCCACTCGGCCTT 120848 || |||||||| | |||||||| ||||| Sbjct 33 TGCCGATCCACCGCTGAGCCCACTCTGCCTT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483278245248840