Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20SUA001_20[genbank_20GCA_5F001244535.1_202015-08- 05] 23,591 sequences; 11,754,406 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq2916 120 3e-22 >seq2916 Length=312 Score = 120 bits (132), Expect = 3e-22 Identities = 104/129 (81%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 27504 GGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGA 27563 |||||| || ||||| ||||||||||| || || ||||| || ||||| || ||||||| Sbjct 1 GGAGGGCATCCCTCCTGACCAGCAGCGCCTCATCTTTGCCGGCAAGCAGCTGGAGGATGG 60 Query 27564 TCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 ||| ||||| || |||||||| |||| ||||| || || || || || || |||||||| Sbjct 61 TCGCACCCTGGCTGACTATAACATCCAGAAGGAGTCTACCCTCCACCTGGTGTTGCGTCT 120 Query 27624 TCGCGGTGG 27632 |||||||| Sbjct 121 GCGCGGTGG 129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570142222591920