Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20SUA001_20[genbank_20GCA_5F001244535.1_202015-08- 05] 23,591 sequences; 11,754,406 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq3067 614 7e-171 seq1947 284 2e-71 seq3161 280 2e-70 seq2806 235 7e-57 seq12 196 6e-45 seq441 174 2e-38 seq17377 120 4e-22 seq213 116 5e-21 >seq3067 Length=2383 Score = 614 bits (680), Expect = 7e-171 Identities = 1450/2165 (67%), Gaps = 61/2165 (3%) Strand=Plus/Plus Query 184981 AACAAAATTTCCAAAATTTAATCAAGATTTGGCAAGTGATCCTACAACTAGGAGATTGTG 185040 |||||| || |||||||||| || | | |||||| || || || || | || | || Sbjct 20 AACAAAGTTCCCAAAATTTAGCCAGGGTCTGGCAAAAGACCCGACTACCCGTCGAATTTG 79 Query 185041 GTATGGATTAGCAACTGCACATGACTTTGAGAGTCATGACAATATGACAGAAGAGAAGTT 185100 |||||| | || ||||| ||||||||||||||||||||||| || || ||||||| | Sbjct 80 GTATGGGATTGCCACTGCTCATGACTTTGAGAGTCATGACAACATCACCGAAGAGAGTCT 139 Query 185101 ATATCAAAAATTATTTGCTACACACTTTGGTCATCTTGCAATTATCTTTCTATGGGTTGC 185160 ||||||||| | ||||| | ||||| || || | ||||| || || |||||| | | Sbjct 140 ATATCAAAAGATCTTTGCCTCTCACTTCGGACAGTTGGCAATCATTTTCCTATGGACTTC 199 Query 185161 AGGTAATTTAATTCATATAGCATGGCAAGGTAACTTTGAACAGTTTGTAGCAGACCCACA 185220 || || | | || |||| ||||| || || ||| ||| | || |||||| Sbjct 200 GGGCAACCTGTTCCACGTAGCGTGGCAGGGCAATTTTCCACAATGGGTTCAAGACCCTTT 259 Query 185221 ACATGTGATACCTATAGCACATAGAATATGGGATCCTCATTTTGGTCAAGGTGCAACAGA 185280 ||||| | ||| || || || ||| |||||||| || || || ||| ||| ||| Sbjct 260 GCATGTTAGACCGATCGCGCACGCAATCTGGGATCCCCACTTCGGCCAACCGGCAGTAGA 319 Query 185281 TGCATACACACAGGCAGGTTCTACTTTTCCTGTGAACAGATTGTATTCTGGACTGTATCA 185340 |||| || | | ||| | || || |||| | || || |||| || Sbjct 320 GGCATTTACTCGTGGTGGTGCCCAGGGGCCAGTTAACATTGCGACCTCAGGGGTGTACCA 379 Query 185341 TTGGTGGTACACAGTTGGTATGAGAACTAATATGCAACTGTATACTGGTGGTGCATT--- 185397 |||||||||||| | || ||| | || ||| | | |||| || | || Sbjct 380 ATGGTGGTACACAATAGGGATGCGCACCAATCAGGACCTGTTCCAAGGATCAGTTTTCCT 439 Query 185398 TATGATTCTACTAGCATTGGTATCTTTACTTGGTGCTCAAT---TACATCTGAAACCAAA 185454 || ||||| || |||| || ||| ||| || | || || |||||| Sbjct 440 TACTATTCTGTCAGGATTG------TTCCTTTTTGCCGGATGGCTTCACCTTCAACCAAG 493 Query 185455 GTTTGCACCTAAGCTTGCTTGGTTTAAAGATAATG-AGAACAG--ATTAAATCATCATCT 185511 |||| || | || ||||||||| || | |||| | | |||| ||||| || Sbjct 494 GTTTCAGCCCGCATTGGCCTGGTTTAAA---AACGCAGAATCGCGACTAAACCATCACCT 550 Query 185512 ATCAGTTCTATTTGGATTCAGTTCTATTGCATGGGCTGGTCATTTGATACACGTAGCAAT 185571 |||| | ||||| | ||||| | || ||| |||| |||||| | ||||| || || Sbjct 551 TTCAGGATTGTTTGGTGTGAGTTCATTGGCTTGGACTGGGCATTTGGTGCACGTTGCCAT 610 Query 185572 ACCTGCATCAAGAGGA-ATCACTGTAGATTGGACTAATTATGTGTTTATGAAA---CCTC 185627 || | | || ||||| | ||| | ||| |||| | || ||| | | || | Sbjct 611 CCCGGAAGCACGAGGACAGCACGTTCGATGGGACAACTTCC----TTACCACATTGCCAC 666 Query 185628 ATCCTGCAGGT-TTACTGCCATTCTTTACAGGAAACTGGGGTGTTTATGCACAAAATCCT 185686 ||||| ||| || || |||||||| |||| ||||||| ||| ||||| ||||| || Sbjct 667 ATCCTCAAGGGCTTGCT-CCATTCTTCTCAGGTAACTGGGCTGTATATGCCCAAAACCCA 725 Query 185687 GATGGATTAAATCAAATATTCAATACAACAGAGGGTTCTGGAACAGCAATATTAACATTC 185746 || | ||| | || || |||| || | || || |||||| |||| ||| Sbjct 726 GACTCCGCAGCTCATCTCTTTGGAACGTCAGAAGGGGCCGGCACTGCAATACTAACCTTC 785 Query 185747 ATGGGTGGTTTCCATCCACAAACAGAG-GCATTATGGTTGACTGATATAGCACATCATCA 185805 ||||||| || |||||||||||| || || || ||||| || || || || || || || Sbjct 786 TTGGGTGGATTTCATCCACAAACACAGAGCCTT-TGGTTAACCGACATTGCTCACCACCA 844 Query 185806 CCTTGCAATAGGAGTAATATTCATTATTGCAGGTCATATGTATAGAAGTG-CTTGGGGTA 185864 | | || || | |||| | || || |||| ||||| ||||| ||| ||| ||| | Sbjct 845 CTTAGCTATTGCAGTAGTCTTTATCCTTGCTGGTCACATGTACCGAACCAACTTCGGG-A 903 Query 185865 TTGGTCACTCAATGAAGGAGATACTTGAAGCACATACACCACCAAGAGGAGGACTAGGTG 185924 |||||||| ||||| | ||||| | || || || || |||||||| || || || |||| Sbjct 904 TTGGTCACACAATGCAAGAGATTTTAGATGCCCACACTCCACCAAGCGGTGGTCTTGGTG 963 Query 185925 CAGGTCATAAAGGATTATATGAAACAGTTACAGACTCATTACACCTACAGTTAGGTCTTG 185984 | ||||| || || | | ||| ||||||| |||| | || | || || || || | Sbjct 964 CTGGTCACAAGGGTCTGTTTGATACAGTTAATAACTCGCTCCATTTCCAATTGGGGCTGG 1023 Query 185985 CACTTGCATCTCTAGGTGTTGTTACTAGTCTGGTGGCACAACATATGTACTCAATGCCAT 186044 || | || | | || | || ||||| |||||||| |||||||| | || Sbjct 1024 CATTGGCTAGTGTTGGAACAATCACCTCACTGGTAGCACAACACATGTACTCGCTCCCTC 1083 Query 186045 CCTATGCTTTCATAGCACAGGCGCATACTACGCAAGCTGCTCTATATGTTCATCATCAAT 186104 | ||||| ||| |||| || | || || || ||| |||| || || ||||||| Sbjct 1084 CGTATGCATTCTTAGCGCAAGATTTCACCACACAGGCTTCTCTCTACACACACCATCAAT 1143 Query 186105 ACATTGCAACTGCTCTGATGGTTGGTG---CTTTTGCGCATGGAGCAATATTTTTTGTTA 186161 ||||||| || | | || || ||| | ||||| ||||| || || || |||||| Sbjct 1144 ACATTGC---TGGTTTCATACTTTGTGGGGCGTTTGCTCATGGTGCGATCTTCTTTGTTC 1200 Query 186162 GAGACTTTGATCCTACTCTGAATAAGGACAATGTTCTTGATAGAATGCTACAGCACAAAG 186221 | || | ||||| | || |||| ||| || | | | || || | || || | Sbjct 1201 GGGATTACGATCCAGAGCAAAACAAGGGCAACGTATTAGCACGGATTTTAGACCATAAGG 1260 Query 186222 AAGCAATTATAAGTCACTTAAGTTGGGTATCACTATTCCTTGGATTCCATACTTTAGGAA 186281 | ||| | || ||| |||||||||| | ||| | || ||||| || | ||| Sbjct 1261 AGGCAGTGATTTCCCACCTAAGTTGGGTCAGCTTGTTCTTGGGCTTCCACACGCTTGGAC 1320 Query 186282 TCTATGTCCATAATGATGTAGTAATGGCATTTGGTCATCCTGAGAGACAGATATTAATTG 186341 | || ||||| ||||| || | || || || |||||||| ||||||||| |||| Sbjct 1321 TTTACGTCCACAATGACGTTATGCAAGCCTTCGGAACTCCTGAGAAACAGATATTGATTG 1380 Query 186342 AACCTATATTTGCACAGTGGATACAGGCAGCATCAGGTAAGATGATGTATGGATTAAGTT 186401 | ||| | ||||| || ||||||||||| ||| ||| || | | |||||||| | Sbjct 1381 AGCCTGTGTTTGCTCAATGGATACAGGCTGCACAAGGGAAAACTCTCTATGGATTTGATC 1440 Query 186402 TCTTACTATCTGATCCAAATAGTGCTGCAAGTCTAGCAG--CAGAGAGTATGCCTGGTAA 186459 | || || || | | ||||| | || | |||| || | | | || ||| | Sbjct 1441 TGTTGCTTTCGCAGTCTAATAGCCCAGCTTTTTCTGCAGGTCAAACATTGTGGCTGCCA- 1499 Query 186460 TCATTACTGGATGAGTGCTATG-AATGATCA--AACAAACAGTC--TGTTTCTACCAATA 186514 || || | | | | ||| | || ||||| | || |||| ||| | || Sbjct 1500 --------GGTTGGCT-CGACGCAATTAACAGCAACAACAACTCATTGTTCCTAACCATT 1550 Query 186515 GGACCTGCTGATTTATTAGTTCATCATGCTATTGCACTTGGATTACATACTACAACTTTA 186574 || || | || || | ||||| ||||||||||| ||||| || || || || || | Sbjct 1551 GGGCCAGGAGACTTCCTTGTTCACCATGCTATTGCGCTTGGTTTGCACACCACTACCCTT 1610 Query 186575 ATCCTAGTCAAGGGTGCATTAGATGCTAGAGGTTCAAAACTCATACCAGATAAGAAAGAT 186634 || || || || || || |||||||| |||| || || || || || |||||||| || Sbjct 1611 ATTCTTGTTAAAGGCGCTTTAGATGCCCGAGGATCTAAGCTTATGCCGGATAAGAAGGAC 1670 Query 186635 TTAGGATATTCATTCCCTTGTGATGGTCCAGGCAGAGGTGGTACTTGTGATAGTTCTGGT 186694 || || || |||||||| || || ||||| |||||||||| ||||||| |||| Sbjct 1671 TTCGGTTACAGCTTCCCTTGCGACGGACCAGGGCGAGGTGGTACATGTGATATCTCTGCA 1730 Query 186695 TGGGATGCTTTCTATCTCTCTGTGTTCTGGGCATTCAATACAATAGCATGGGCAGATTTT 186754 ||||| || |||||| | | || |||||| || || || || | ||||| | || Sbjct 1731 TGGGACGCATTCTATTTGGCAGTTTTCTGGATGTTAAACACTATTGGATGGGTAACCTTC 1790 Query 186755 TATTGGCACTGGAAGAACCTTGCTAGTTGGCAAGGTAATCAGGCA--CAATTCAATACAT 186812 |||| || ||||| | | | | ||||||||| || | || |||||||| | Sbjct 1791 TATTTCCATTGGAAACATTTGGGAATTTGGCAAGGCAAC--GTCAACCAATTCAACGAGT 1848 Query 186813 CAGGAACATATCTTATGGGTTGGTTCAGAGATTATCTCTGGGCGAA-TAGTGCGCCTGTA 186871 | |||||||| ||||| ||| | ||||| || || ||| || | || | | | Sbjct 1849 CTTCTACATATCTAATGGGATGGCTTAGAGACTACCTGTGGCTTAACTCGT-CACAGCTC 1907 Query 186872 ATCACAGGGTACACACCATTTGGTATGAATAATCTCTCTGTATGGGCATGGATGTTCTTG 186931 |||| || |||| || || |||||||||| | || || |||||||||||||||||| Sbjct 1908 ATCAACGGCTACAACCCGTTCGGTATGAATAGCTTGTCAGTTTGGGCATGGATGTTCTTG 1967 Query 186932 TTTGGTCATTTAGTTTGGGCAACAGGATTTATGTTCCTTATTTCTTGGAGAGGTTATTGG 186991 ||||| || ||| | | || || || || |||||| | ||||| ||| | ||||| ||| Sbjct 1968 TTTGGGCACTTAATCTACGCTACTGGTTTCATGTTCTTGATTTCGTGGCGTGGTTACTGG 2027 Query 186992 CAAGAGTTAATTGAGACTCTTGCTTGGGCACATCAAAGAACTCCAATAGCAAATATAGCA 187051 ||||| || || || || || || ||||| ||| ||||||| || | || ||| ||| | Sbjct 2028 CAAGAATTGATCGAAACACTCGCCTGGGCTCATGAAAGAACACCGTTGGCCAATCTAGTA 2087 Query 187052 GGTTGGAGAGATAAACCAGTGGCACTTTCTATTGTTCAAGCAAGACTAGTTGGTTTATCA 187111 | ||||||||||||||||| ||||| || |||||||||||| || | ||||| || | Sbjct 2088 CGCTGGAGAGATAAACCAGTTGCACTATCAATTGTTCAAGCACGATTGGTTGGATTGGCC 2147 Query 187112 CATTT 187116 ||||| Sbjct 2148 CATTT 2152 >seq1947 Length=534 Score = 284 bits (314), Expect = 2e-71 Identities = 395/553 (71%), Gaps = 23/553 (4%) Strand=Plus/Minus Query 191258 TTTGCACCTTCATTTGGAGTTGCAGCAATCTTTAGATATATTCTATTCATTCAAGGTTTC 191317 ||||||||| ||||| || || |||||||| | | || || ||| | ||||| ||| Sbjct 532 TTTGCACCTAGCTTTGGTGTGGCTGCAATCTTCCGTTTCATCCTCTTCTTCCAAGGGTTC 473 Query 191318 CACAATATTACACTCAACCCTTTCCACATGATGGGAGTTGCAGGTATTCTAGGTGGAGCA 191377 ||||| ||||| |||||||||||||||||||| || || || | |||| | ||| Sbjct 472 CACAACTGGACACTTAACCCTTTCCACATGATGGGTGTGGCTGGCGTGTTAGGAGCTGCA 413 Query 191378 TTACTATGTGCCATTCATGGTGCTACAGTACAGAACACCTTGTATGAGGACTCAAGCATC 191437 | || ||||| |||||||| || ||||| ||||||| ||| ||| || Sbjct 412 CTTCTTTGTGCAATTCATGGCGCAACAGTTGAGAACACGCTGTTTGAAGA---------- 363 Query 191438 TATACAGATGGTCAAGTTCAAAGTACAACCTTTAGAGCATTTGATCCAACACAGGATGAG 191497 | ||||||| |||| || || | || || |||| || |||| ||| Sbjct 362 --TGGAGATGGTG-----CAAAC----ACATTCCGTGCGTTCAATCCTACTCAGGCTGAA 314 Query 191498 GAAACTTATTCTATGATCACTGCAAACAGATTCTGGTCACAGATATTTGGTATTGCATTC 191557 || || || |||||| | ||||||||| | |||||||||||||| ||||| | |||||| Sbjct 313 GAGACCTACTCTATGGTAACTGCAAACCGTTTCTGGTCACAGATCTTTGGAGTAGCATTC 254 Query 191558 TCTAACAAAAGATTTCTACACTTCTTGATGTTGTTTGTTCCTGTAATGGGAATGTGGACA 191617 |||||||| | | | |||||||| ||| | |||||||| |||| || | |||| Sbjct 253 TCTAACAAGCGTTGGTTGCACTTCTTCATGCTTTTTGTTCCGGTAACCGGTCTTTGGATG 194 Query 191618 TCATCAATAGGTATTGTAGGTCTTGCACTTAACTTAAGAGCATATGATTTTGTATCTCAA 191677 | || ||| | |||| || || || ||||| | || ||||| || || |||||| Sbjct 193 AGTGCTATTGGTGTCTTAGGCCTAGCGCTAAACTTGCGTGCTTATGACTTCGTTTCTCAA 134 Query 191678 GAGATAAGAGCAGCAGAAGACCCAGAGTTTGAAACCTTCTATACTAAGAACATTCTTCTT 191737 ||||| | |||||||||||||| || || ||||||||||| || || ||||| ||| || Sbjct 133 GAGATTCGCGCAGCAGAAGACCCTGAATTCGAAACCTTCTACACAAAAAACAT-CTTGTT 75 Query 191738 -AATGAAGGTATGAGAGCATGGATGTCTTCAGTAGACCAACCTCATGAGAACTTTGTGTT 191796 || |||||||| ||||||||||| | | |||||| || || || || |||| || Sbjct 74 GAACGAAGGTATTCGAGCATGGATGGCGGCTCAAGACCAGCCACACGAAAAACTTGTATT 15 Query 191797 CCCAGAGGAAGTT 191809 ||| ||||| ||| Sbjct 14 CCCTGAGGAGGTT 2 >seq3161 Length=578 Score = 280 bits (310), Expect = 2e-70 Identities = 302/398 (76%), Gaps = 4/398 (1%) Strand=Plus/Minus Query 190247 TTCTCTGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAAACAACTGGTTTA 190306 ||||| |||||||| |||||| | ||||| || ||||| ||| | ||||| |||| Sbjct 576 TTCTCAGCAATGCACGGTTCATTGGTAACTTCATCTCTTATCCGTGAAACTACTGAGAAC 517 Query 190307 GAGTCACAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAAACATACAACATAGTAGCT 190366 || || ||| |||||||||||| || |||||||||||||| |||||||| || ||| Sbjct 516 GAATCTGCTAACGCTGGTTACAAGTTCGGTCAAGAAGAAGAAACTTACAACATTGTTGCT 457 Query 190367 GCTCATGGTTACTTTGGTAGACTTATCTTCCAGTATGCTTCATTCAACAACTCAAGAAGT 190426 || || |||||||||||| | || |||||||| || ||||||||||||||||| | | Sbjct 456 GCACACGGTTACTTTGGTCGTCTAATCTTCCAATACGCTTCATTCAACAACTCTCGTTCT 397 Query 190427 TTACACTTCTTCTTAGCAGTATTCCCTGTAACCTGTGTATGGTTAACATCAATGGGTATT 190486 | ||||||||| | || | || |||||| || | ||||| || | | ||||| Sbjct 396 CTTCACTTCTTCCTTGCTGCATGGCCTGTAGTTGGTATCTGGTTCACTGCTCTTGGTATC 337 Query 190487 TGCACAATGGCATTCAACTTAAATGGTTTCAACTTTAACCAGTCTGTAGTTGATGCACAA 190546 | || |||||||||||| | || ||||||||||| ||||||||||||||||| | ||| Sbjct 336 TCTACCATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTTGACTCTCAA 277 Query 190547 GGTAAAATTGTTCCAACA--TGGGGCGATGTTCTTAACAGAGCAAACCTTGGTATGGAAG 190604 ||| | | ||||| ||||| || | | ||| | || ||||| |||||||||| Sbjct 276 GGTCGTGTAAT--CAACACTTGGGGTGACATCATCAACCGTGCTAACCTAGGTATGGAAG 219 Query 190605 TAATGCATGAAAGAAATGCACACAACTTCCCACTAGAC 190642 ||||||| || | || || |||||||||||||||||| Sbjct 218 TAATGCACGAGCGTAACGCTCACAACTTCCCACTAGAC 181 >seq2806 Length=1332 Score = 235 bits (260), Expect = 7e-57 Identities = 612/938 (65%), Gaps = 69/938 (7%) Strand=Plus/Minus Query 184070 GATGCAATCATCAGTCACTTGAACTGGGTATGCATCTTTTTAGGTTTTCATAGTTTTGGT 184129 ||||| || ||| |||| |||||||||| |||||||| || || || || || |||||| Sbjct 1115 GATGCGATTATCTCTCACCTGAACTGGGTTTGCATCTTCTTGGGATTCCACAGCTTTGGT 1056 Query 184130 CTTTATATTCACAATGATATTATGAGAGCATTGGGTAGACCTAATGATCTATTCAGTGAT 184189 || || ||||||||||||| ||||| || || ||| | ||| | || | ||| ||| Sbjct 1055 CTCTACATTCACAATGATACGATGAGTGCTTTAGGTCGCCCTCAGGACATGTTCTCTGAC 996 Query 184190 ACAGCAATACAATTACAACCTGTATTTGCACAGTCTGTTCAGAGATTACATGCTTCATTA 184249 || || || || | || || || |||||||| | | || | ||||| ||| Sbjct 995 ACCGCGATTCAGCTGCAGCCCGTGTTTGCACAATGGATACAAAACACACATGTGTCAGCG 936 Query 184250 TATAATGTCTCTG------ATGTATTTGGTGGATCAACCACAAT---------------- 184287 | | || | | ||| ||| | | | | |||| Sbjct 935 CCTCAGTTCACAGCGCCCAATGCATTAGCACCTACGAGCCCAATTTGGGGTGGGGATGTA 876 Query 184288 -----GGTTGGTGGTAAGATTGCT--AATGCTCCTTTTGTACTAGGTACAGCAGACTTTA 184340 ||||||||||||| | || ||||| || | | || || || ||||||| Sbjct 875 GTAGCGGTTGGTGGTAAGGTGGCGGCAATGC--CTATGACCTTGGGAACTGCGGACTTTA 818 Query 184341 TGATACATCACATACACGCTTTCCAGATTCATGTTTGTGTATTAATTCTTCTCAAGGGTG 184400 || | || || || || || ||| || ||||| || || || || || || |||| Sbjct 817 TGGTTCACCATATCCATGCATTCACTATCCATGTCACAGTTTTGATCCTGCTTAAAGGTG 758 Query 184401 T--TTTATACTCTAGAAACTCACAATTAATACCAGATAAGAGTAAGTTAGGATTCAGATT 184458 | ||||| | | | | ||| | | || ||||| ||| || |||| ||| |||| Sbjct 757 TACTTTATGCCC--GCAGCTCTCGTCTTATCCCAGACAAGGCAAATCTAGGTTTCCGATT 700 Query 184459 CCCTTGTGATGGTCCTGGTAGAGGAGGCACTTGTCAGGTATCAGGATGGGATCATGTATT 184518 ||| ||||| || || || | || ||||| || ||||| || | |||||| || || || Sbjct 699 CCCATGTGACGGCCCGGGACGTGGGGGCACATGCCAGGTTTCTGCATGGGACCACGTGTT 640 Query 184519 CCTTGGTTTATTCTGGATGTATAATTGCATCTCTATAGTAATCTTCCACTTTAGTTGGAG 184578 ||| || |||||||||||||||| | || |||| ||||||||||| || |||| Sbjct 639 CCTAGGACTATTCTGGATGTATAACGCGTTATCAATAGCGATCTTCCACTTCAGCTGGAA 580 Query 184579 AATGCAA---GATGTATGGGG----------------------TCTATCA-----GGAGG 184608 ||||||| ||| | ||||| ||| || || || Sbjct 579 AATGCAATCTGATATTTGGGGAACGGTTAACAGCACCGGCGTGTCTCACATTACTGGGGG 520 Query 184609 TAACTTTGCTCAGAGTTCAATTACAATCAATGGATGGTTGAGAGACTTCTTATGGTCACA 184668 |||||||| ||||| ||| || || ||||| ||| | |||| ||||| ||| |||| Sbjct 519 CAACTTTGCACAGAGCGCAAACACGATTAATGGGTGGCTACGAGATTTCTTGTGGGCACA 460 Query 184669 GTCAAGTCAAGTTCTCAATAGTTATGGACAAGACAT--CAGCATGTATGGTTTGCTATTT 184726 || || || || | ||||| | | | |||||| |||| ||| | || Sbjct 459 ATCTTCGCAGGTAATCCAGTCATATGGGTCTGCCTTGTCAGCAT--ATGGATTGATCTTC 402 Query 184727 CTTGGAGCACATTTTGTATGGGCATTCAGTTTGATGTTCCTATGGAGTGGTAGAGGATAC 184786 | |||||||| ||||| ||||||||||| | |||||||| | || || | || ||| Sbjct 401 TTGGGAGCACACTTTGTTTGGGCATTCAGCCTTATGTTCCTTTTCAGCGGCCGCGGCTAC 342 Query 184787 TGGCAAGAGTTGATAGAGTCTATTGCTTGGGCACATAACAAATTAAAACTTGCACCTACC 184846 |||||||| | || || || |||| ||||| || |||||||| || |||| ||| | Sbjct 341 TGGCAAGAACTTATTGAATCCATTGTGTGGGCTCACAACAAATTGAAGGTTGCTCCTTCT 282 Query 184847 ATTCAACCAAGAGCAATGTCAATTACACAAGGACGTGCTGTTGGAGTTGCACACTTCTTA 184906 || || ||| | || | ||||| || || || || |||||||| || || | | | Sbjct 281 ATCCAGCCACGTGCGCTTAGCATTACCCAGGGCCGCGCAGTTGGAGTAGCTCATTACCTT 222 Query 184907 CTTGGAGGTATTGCCACAACATGGGCATTCTTCTTTGC 184944 ||||| || ||||| || || ||| | |||||||| || Sbjct 221 CTTGGGGGGATTGCGACTACTTGGTCGTTCTTCTTAGC 184 >seq12 Length=429 Score = 196 bits (216), Expect = 6e-45 Identities = 291/413 (70%), Gaps = 0/413 (0%) Strand=Plus/Minus Query 190832 TTTGTATTCATAGGTTGGTCTGGTCTTATATTATTACCATGTGCTTTCCTATCAATTGGT 190891 ||||| ||| | ||||||||||| | || | || || || |||| || | | ||| Sbjct 428 TTTGTGTTCGTTGGTTGGTCTGGCTTGCTACTTTTCCCTTGCGCTTATCTTGCCTTGGGT 369 Query 190892 GGTTGGTTCACAGGAACTACATTTGTTACTAGTTGGTATACACATGGAATTGCATCTTCA 190951 || ||||| |||||||| || || || || |||||| || || || | ||| |||| Sbjct 368 GGCTGGTTTACAGGAACCACTTTCGTAACATCTTGGTACACGCACGGCTTAGCAAGTTCA 309 Query 190952 TACCTTGAAGGAGCAAACTTTTTGACAGCAGCAGTATCCACACCTGGTGATGCTATGGGT 191011 ||||| ||||| ||||| || ||||||||||| || || || | | ||||| Sbjct 308 TACCTAGAAGGTTGCAACTTCTTAACAGCAGCAGTGTCAACTCCAGCAAACAGCATGGGG 249 Query 191012 CATAGTTTATTATTCTTATGGGGTCCAGAGGCACAAGGTTCATTTGTTCGTTGGTTACAA 191071 ||| || | ||| ||||||| |||||||| ||||| || || |||| ||| Sbjct 248 CATTCATTGCTCTTCCTATGGGGCCCAGAGGCTCAAGGAGACTTCACACGATGGTGCCAA 189 Query 191072 ATTGGTGGACTTTGGAACTTTGTAGCACTTCATGGTGTATTTGGTCTCATAGGATTCATG 191131 | ||||| ||||||| ||||||||| |||||||||| || | ||| || || |||||| Sbjct 188 TTGGGTGGTCTTTGGACCTTTGTAGCTCTTCATGGTGCTTTCGCTCTAATTGGGTTCATG 129 Query 191132 TTACGTCAGTTTGAAATTGCAGGATTGGTGGGTATTAGACCTTACAATGCTCTTGCTTTT 191191 | ||||||||||| ||||| | | || || | |||||||||||| |||| || Sbjct 128 CTGCGTCAGTTTGAGCTTGCACGCTCTGTAAAGCTTCGTCCTTACAATGCTATTGCATTC 69 Query 191192 TCTGCTGTCATAGCAGTTTTCACAAGTGTATTCTTAATCTATCCACTTGGTCA 191244 || || || ||||| ||| ||| ||||| |||||||| || || || Sbjct 68 TCAGCACCAATCGCAGTGTTCGTTTCTGTGTTCTTGATCTATCCTCTAGGACA 16 >seq441 Length=1304 Score = 174 bits (192), Expect = 2e-38 Identities = 363/537 (68%), Gaps = 3/537 (1%) Strand=Plus/Plus Query 182844 CTTTAGCAAAAGGACCTAAAACAACCACATGGATATGGAATTTACACGCAGATGCTCATG 182903 || || | ||||| || |||||| || ||||| |||||||| || |||||||| || | Sbjct 330 CTCTATCCAAAGGTCCGTCAACAACGACTTGGATTTGGAATTTGCATGCAGATGCGCACG 389 Query 182904 ATTTTGATAAGCATTCTAGTGATCTGCAAGAGAATTCAAGAAAAATATTTGCTGCACACT 182963 |||| |||| || | || ||||| | |||| || | ||| ||||| ||| |||| Sbjct 390 ATTTCGATAGCCACACCAGCGATCTAGAGGAGATCTCTCGGAAAGTATTTAGTGCTCACT 449 Query 182964 TTGCTCATCTAGGTATCATCTTTGTATGGATGAGCAGTTTCTTCTTTCAAGGTGCTAGGT 183023 ||| || |||| |||||| || | ||| | || | | | || || || || | | Sbjct 450 TTGGGCAATTAGGCATCATCCTTATTTGGCTTAGTGGGATGTATTTCCACGGGGCACGAT 509 Query 183024 TTTCAAACTATACAGGATGGTTGGCAGACCCAACTCATGTAAAACCTGGTGCTCAAGTGG 183083 | || || || | ||||| || || | || | || || |||| || || | Sbjct 510 TCTCGAATTACGAGGCGTGGTTAAGTGATCCGATACACATTAAGCCAAGTGCACAGGTTG 569 Query 183084 TTTGGCCTATACTTGGTCAAGAGATATTGAATGGAGATCAGGGTGCAGGATATCAAGGTA 183143 |||||||||| | |||||||||||| | || |||||| ||||| ||| | ||||| Sbjct 570 TTTGGCCTATTGT-GGTCAAGAGATACTAAACGGAGATGTGGGTGGAGGTTTCCAAGGGG 628 Query 183144 TTAGAATTACATCTGGTTTATTTCAGATGTGGAGAGCATGGGGTATAACAAATGAAACTC 183203 | ||||| || || || || || | ||| | || | ||||| || | ||| || Sbjct 629 TACAGATTACCTCGGGATTCTTCCAACTTTGGCGCGCGAGTGGTATTACTAGTGAGCTTC 688 Query 183204 AACTA-ATGGCGCTAGCACTAGGTGCTTTAGTTATGGCAGCAGTTATGTTTAATGCTGGT 183262 |||| | || | ||| |||||| || || | ||||| | ||||| || ||| Sbjct 689 AACTGTACAGCAC-AGCGATAGGTGGGTTGGTGCTCGCAGCTGCAATGTTCTTCGCGGGT 747 Query 183263 GCATTTCATTTTCACGTTGCTGCTCCTAAGTTATCATGGTTTCAGAATGTAGAATCTATG 183322 || |||| |||| || || || || || ||||||||||||||| ||||| ||| Sbjct 748 TGGTTCCATTATCACAAGGCGGCACCAAAATTGGAATGGTTTCAGAATGTGGAATCGATG 807 Query 183323 ATGAATCATCACCTTGCAGGTTTGCTTGGTCTTGGTTCTTTAGGATGGGCAGGACAT 183379 | |||||||| | |||||| |||| || | ||| |||| ||||| |||||| Sbjct 808 CTAAATCATCATTTAGCAGGTCTGCTCGGATTGGGTAGCTTAGCGTGGGCTGGACAT 864 >seq17377 Length=307 Score = 120 bits (132), Expect = 4e-22 Identities = 122/159 (77%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 182482 GTTAATGTCTCACGCCGTTAAAATATATGATACTTGCATTGGATGCACACAATGTGTGAA 182541 ||| |||||||| | || ||||| ||||| || |||||||||||||| |||||||| Sbjct 148 GTTTATGTCTCATTCTGTAAAAATCTATGACACCTGCATTGGATGCACGCAATGTGTTCG 207 Query 182542 GGCTTGTCCATTGGATGTATTAGAAATGGTTCCTTGGGATGGGTGCAAAGCAAAGCAAAT 182601 || || ||| || || ||||||||||| ||||||||||| |||||||| | ||||| Sbjct 208 TGCGTGCCCAACCGACGTTTTAGAAATGGTCCCTTGGGATGGTTGCAAAGCTAGCCAAAT 267 Query 182602 TGCTTCCTCACCTAGAACTGAGGATTGTGTAGGATGTAA 182640 || || | || | || || || ||||||||||| || Sbjct 268 CGCGTCGGCTCCCCGCACAGAAGACTGTGTAGGATGCAA 306 >seq213 Length=407 Score = 116 bits (128), Expect = 5e-21 Identities = 109/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 190026 TAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGCAG 190085 |||||||| | ||||||||| ||| ||||| || |||||||| | || || ||| | Sbjct 218 TAGGTATGCGTCCTTGGATCGCTGTAGCTTACTCTGCACCAGTTGCAGCTGCTACTGCTG 159 Query 190086 TATTCCTTGTATACCCATTTGGTCAGGGTTCATTCTCTGATGGTATGCCTTTAGGTATCT 190145 ||||| | | |||||| | ||||| ||||||||||| || |||||||| |||| || | Sbjct 158 TATTCATCATCTACCCAATCGGTCAAGGTTCATTCTCAGACGGTATGCCACTAGGCATTT 99 Query 190146 CAGGTACATTCAACTTCAT 190164 | ||||| ||||||||||| Sbjct 98 CGGGTACTTTCAACTTCAT 80 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631241000011560