Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_001317.1 Length=30624 Score E Sequences producing significant alignments: (Bits) Value seq8309 123 5e-24 >seq8309 Length=800 Score = 123 bits (136), Expect = 5e-24 Identities = 270/397 (68%), Gaps = 12/397 (3%) Strand=Plus/Plus Query 14808 TCGGTCTGCGTGCCTACATCGACCAGACTATCGGCTGGCACAAAACGCTGTCTAACGTTG 14867 |||| ||||| ||| | ||||| || ||||||||||||| ||| | || ||||| | Sbjct 381 TCGGCCTGCGCGCCAAGCTCGACGAGGAAGTCGGCTGGCACAAGACGATCTCCAACGTCG 440 Query 14868 GCGTGCAGGGCGTTACCGGCATCAGCGCC----TCAGTCTTTTGGGATTTGCAGGCATCC 14923 || | ||||| |||| | | | | |||| ||| | |||||| || Sbjct 441 CGGTCAACGGCGTCGTCGGCCTGACCCGCAAGATCAG-CTTC---GCCCTGCAGGACCCC 496 Query 14924 GGCACAGATGCTGACCTGCTCAACGAGGCCGGAGTCACCACGCTGGTGCGCAAGGATGGT 14983 || || || | | | || |||| ||||| |||||| ||||| | ||| || | || Sbjct 497 TCGACCGACGCCGGCGTCCTGAACGCCGCCGGCGTCACCGCGCTGATCCGCCAGAACGGC 556 Query 14984 TTCCGTTTTTGGGGGAACCGCACATGCTCTGATGACCCGCTTTTCCTGTTTGAGAACTAC 15043 ||||| || ||||| |||| || |||||||| || ||| |||| ||| || | | | Sbjct 557 TTCCGCTTCTGGGGCAACCAGACCTGCTCTGACGAGCCGGCCTTCCAGTTCGAAAGCGCC 616 Query 15044 ACCCGAACCGCGCAGGTGCTGGCCGACACAATGGCTGAGGCGCAC-ATGTGGGCGGTCGA 15102 |||| ||||| | | || ||||| || || |||| ||| |||||||||||||| Sbjct 617 GCCCGCACCGCCGACATCCTCAAGGACACCATCGCCGAGG-GCATGATGTGGGCGGTCGA 675 Query 15103 TAAGCCCATCAC-CGCATCGCTCATCCGTGACATTGTCGACGGCATTAACGCCAAATTCC 15161 ||||| | || | || | || || ||||| |||| ||| |||||||| |||| Sbjct 676 CAAGCCGCTGACGCCCAGC-CTGGCGCGCGACATCATCGAGACCATCAACGCCAAGTTCC 734 Query 15162 GCGAGCTGAAATCAAATGGCTACATCGTGGACGGTGA 15198 || ||||||| | ||||||||| ||| ||| || Sbjct 735 GCCAGCTGAAGGTCCAGGGCTACATCCTGGGCGGCGA 771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97856342201700