Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_001895.1 Length=33593 Score E Sequences producing significant alignments: (Bits) Value seq8309 152 1e-32 >seq8309 Length=800 Score = 152 bits (168), Expect = 1e-32 Identities = 258/367 (70%), Gaps = 10/367 (3%) Strand=Plus/Plus Query 18288 GGGCTGCGCGCTAAAATCGACCAGGAGCAGGGCTGGCATAAAACGCTGTCCAATGTCGGG 18347 || |||||||| || ||||| |||| |||||||| || ||| | ||||| |||| | Sbjct 383 GGCCTGCGCGCCAAGCTCGACGAGGAAGTCGGCTGGCACAAGACGATCTCCAACGTCGCG 442 Query 18348 GTGAACGGTGTTACCGGCATCAGC-GCA---TCTGTATTCTGGGATTTGCAGGAGTCCGG 18403 || ||||| || |||| | | | ||| || | ||| | ||||||| || Sbjct 443 GTCAACGGCGTCGTCGGCCTGACCCGCAAGATCAGC-TTC---GCCCTGCAGGACCCCTC 498 Query 18404 CACCGATGCTGACCTGCTTAACGAGTCAGGCGTCACTACGCTGATTCGCCGCGACGGTTT 18463 ||||| || | | | || |||| | |||||||| ||||||| |||| |||| || Sbjct 499 GACCGACGCCGGCGTCCTGAACGCCGCCGGCGTCACCGCGCTGATCCGCCAGAACGGCTT 558 Query 18464 CCGCTTCTGGGGTAACCGTACCTGCTCTGATGACCCGCTGTTCCTCTTTGAAAACTACAC 18523 |||||||||||| |||| ||||||||||| || ||| |||| || |||| | | | Sbjct 559 CCGCTTCTGGGGCAACCAGACCTGCTCTGACGAGCCGGCCTTCCAGTTCGAAAGCGCCGC 618 Query 18524 CCGCACCGCGCAGGTCGTGGCCGACACGATGGCTGAGGCGCA-CATGTGGGCGGTGGACA 18582 ||||||||| | || | ||||| || || |||| ||| ||||||||||| |||| Sbjct 619 CCGCACCGCCGACATCCTCAAGGACACCATCGCCGAGG-GCATGATGTGGGCGGTCGACA 677 Query 18583 AGCCCATCACTGCAACGCTGATTCGCGACATCGTTGACGGCATCAATGCCAAATTCCGTG 18642 |||| | || | | ||| ||||||||| | || |||||| ||||| ||||| Sbjct 678 AGCCGCTGACGCCCAGCCTGGCGCGCGACATCATCGAGACCATCAACGCCAAGTTCCGCC 737 Query 18643 AGCTGAA 18649 ||||||| Sbjct 738 AGCTGAA 744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107355311664750