Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_004313.1 Length=40149 Score E Sequences producing significant alignments: (Bits) Value seq2179 87.8 5e-13 >seq2179 Length=647 Score = 87.8 bits (96), Expect = 5e-13 Identities = 130/183 (71%), Gaps = 1/183 (1%) Strand=Plus/Minus Query 10510 TCGTGACGCGGATTGGTCCGCTTGGCGGTGTTGCCGGAGTGGCATCCGGCGAAATTGCCG 10569 |||| || ||| | || |||| |||| || ||||| || | || | ||| || |||| Sbjct 639 TCGTCACCCGGGTCGGGGCGCTGGGCGAGGTCGCCGGCGTTTCCTCGGCCGAGATCGCCG 580 Query 10570 CGATGGGCGCCACCATTGCCGGGATGGGGGTTGAATCGGAGATAGCCTCCACCGGCATCA 10629 | ||||| | || |||| ||| |||||||| | ||||| ||| |||||||||||| Sbjct 579 CCCTGGGCTCAACGATTGTCGGCATGGGGGTCAACGAAGAGATCGCCGCCACCGGCATCA 520 Query 10630 AAAACTTCATGCTGTCGTTAACCGCAGGTAATTCGGCAACCAAAGCCCAGAAACAGG-CT 10688 | ||| ||||||| | | ||| || | | || ||||| |||||||| ||| || Sbjct 519 AGAACACCATGCTGGCCCTGACCAAGGGCACGGCCGCCACCAAGGCCCAGAAGAAGGCCT 460 Query 10689 ATG 10691 ||| Sbjct 459 ATG 457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128330469562950