Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_004688.1 Length=110865 Score E Sequences producing significant alignments: (Bits) Value seq6492 120 2e-22 >seq6492 Length=3580 Score = 120 bits (132), Expect = 2e-22 Identities = 197/279 (71%), Gaps = 4/279 (1%) Strand=Plus/Plus Query 99576 CTCGGCGTGGCGCACGCCAGCCTCCTGCATCTGCCGGTATCGGTCGTCCATCTCTACGGT 99635 |||| || ||||||||| || | ||||| | ||| ||||| |||||||| ||| Sbjct 2770 CTCGATGTTGCGCACGCCGAGCTTCGACATCTTCTTGTAGCGGTCCTCCATCTCC-CGGA 2828 Query 99636 GAG-CCACCGCAGCGTTTTCACCGCCTCGTCAGCCTCTGTAACCACGGGCTGGAGAAGGT 99694 | |||| ||||| |||||||| | | || || ||||| ||| ||||||| Sbjct 2829 CCGTCCACTTCAGCGCCACCACCGCCTTCTTCGGGTCGGTGACCACCGGCGTCAGAAGGT 2888 Query 99695 GGGGGATACCGTTGTACGGGGTGAGCTCGACACAT-TTGGGGTCGATCATGATGAGTTTG 99753 | ||||| |||| ||| | |||||| | ||| || |||||||||||||| || | Sbjct 2889 GCGGGATGCCGTCGTAGACCGAGAGCTCCAG-CATCTTCGGGTCGATCATGATCAGCCGG 2947 Query 99754 ACCCGATCAGGGGTCGCCCGGTAGAGCAGCGAAACCAGCATTGAGTTGATGAAGCTGGAC 99813 | | || || ||| ||||||||||||||| | | ||| | |||||| | ||| Sbjct 2948 CACTGCTCCGGCGTCAGCCGGTAGAGCAGCGACAGGATCATCGTGTTGATCGACACCGAC 3007 Query 99814 TTGCCCGATCCGGTCGCGCCAGCCACCAGCAGATGCGGC 99852 |||||||| ||||| | ||| || ||||||| |||||| Sbjct 3008 TTGCCCGAGCCGGTGGTGCCGGCGACCAGCATGTGCGGC 3046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354573072077850