Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_004745.1 Length=30728 Score E Sequences producing significant alignments: (Bits) Value seq8309 131 3e-26 >seq8309 Length=800 Score = 131 bits (144), Expect = 3e-26 Identities = 253/367 (69%), Gaps = 10/367 (3%) Strand=Plus/Plus Query 17102 GGTCTGCGCGCTAAAATCGACCAGGAGCAGGGCTGGCATAAAACGCTGTCCAACGTCGGG 17161 || |||||||| || ||||| |||| |||||||| || ||| | |||||||||| | Sbjct 383 GGCCTGCGCGCCAAGCTCGACGAGGAAGTCGGCTGGCACAAGACGATCTCCAACGTCGCG 442 Query 17162 GTGAACGGTGTTACCGGCATCAGT-GCA---TCCGTCTTCTGGGATTTGCAGAAGCCAGG 17217 || ||||| || |||| | | ||| || | |||| | ||||| | || Sbjct 443 GTCAACGGCGTCGTCGGCCTGACCCGCAAGATCAG-CTTC---GCCCTGCAGGACCCCTC 498 Query 17218 CACTGATGCTGACCTGCTGAACGAGGCAGGCGTCACAACGCTGGTTCGCCGCGACGGTTT 17277 || || || | | | ||||||| || |||||||| ||||| | |||| |||| || Sbjct 499 GACCGACGCCGGCGTCCTGAACGCCGCCGGCGTCACCGCGCTGATCCGCCAGAACGGCTT 558 Query 17278 TCGTTTCTGGGGTAACCGTACCTGCTCTGATGACCCGCTGTTCCTCTTTGAAAGCTACAC 17337 || |||||||| |||| ||||||||||| || ||| |||| || |||||| | | Sbjct 559 CCGCTTCTGGGGCAACCAGACCTGCTCTGACGAGCCGGCCTTCCAGTTCGAAAGCGCCGC 618 Query 17338 ACGCACCGCGCAGGTACTGGCCGACACGATGGCTGAGGCGCA-CATGTGGGCTATTGATA 17396 |||||||| | | || ||||| || || |||| ||| |||||||| | || | Sbjct 619 CCGCACCGCCGACATCCTCAAGGACACCATCGCCGAGG-GCATGATGTGGGCGGTCGACA 677 Query 17397 AGCCCATCACCGCAACGCTGATTCGCGACATCATTGACGGCATCAATGCCAAATTCCGTG 17456 |||| | || | | ||| ||||||||||| || |||||| ||||| ||||| Sbjct 678 AGCCGCTGACGCCCAGCCTGGCGCGCGACATCATCGAGACCATCAACGCCAAGTTCCGCC 737 Query 17457 AACTGAA 17463 | ||||| Sbjct 738 AGCTGAA 744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 98189078080500