Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_005066.1 Length=164018 Score E Sequences producing significant alignments: (Bits) Value seq12887 93.3 4e-14 >seq12887 Length=5378 Score = 93.3 bits (102), Expect = 4e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 53635 AAGGTACGCGCGATAACGTCACGCTGCTGGTCTGGAGTCAGACTATTGAAGCGCACCGCG 53694 |||||||| || || || || ||||||| || |||||| | ||||| |||| || Sbjct 5257 AAGGTACGAGCAATCACCTCCAGCTGCTGATCACGAGTCAATTTGCTGAAGTGCACAGCA 5198 Query 53695 TAACCAGAAACGCGAATTGTAAGCTGCGGGTACTTCTCAGGATGTTCAACAGCGTCCAGC 53754 |||||| || ||||| || || | |||||||||||||| || |||||||| |||| | Sbjct 5197 TAACCACTGACACGAATCGTCAGATTGGGGTACTTCTCAGGGTGCTCAACAGCATCCATC 5138 Query 53755 AACATTTCTCGTAACAATACGTTAATATTCAAATGCTGACCACC 53798 ||||| || | || || || | ||| | || |||||||| Sbjct 5137 AACATCTCCCTGTTCAGCACATTCACATTGATGTGATGACCACC 5094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524623178278000