Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_005135.1 Length=173591 Score E Sequences producing significant alignments: (Bits) Value seq4646 89.7 6e-13 >seq4646 Length=6891 Score = 89.7 bits (98), Expect = 6e-13 Identities = 192/283 (68%), Gaps = 8/283 (3%) Strand=Plus/Plus Query 6913 CTTGCCCGAAGCATTCGCTTTGTGCCCGTGAGTGAGATGGCCGCCGCAGTCCAAGGACAT 6972 ||||||||| |||| ||| ||||| ||||| |||||||| || | | | | Sbjct 871 CTTGCCCGACATGTTCGGCTTGGCGCCGTGGGTGAGGTGGCCGCCCGAGGCGAGGTCGAG 930 Query 6973 AGCGAGAACCGAATCACCCGGCTTCAGGAGTGCTTGGTAAACTGCCTGGTTTGCTTGTGA 7032 |||| | | || |||||||| ||| || || | || |||||||| || || Sbjct 931 GCCGAGGATGGTGTCGCCCGGCTTGGCGAGCGCGAGGAACACCGCCTGGTTGGCCTGGCT 990 Query 7033 ACCGGAATGAGGTTGAACGTTTGCGAAATTGCAACTAAACAG-TTCTTTAGCACGCTCAA 7091 ||||| | || || ||||| ||||| ||||| | ||||| ||| | | | || || | Sbjct 991 GCCGGAGTTCGGCTGGACGTTGGCGAACTTGCAGCCGAACAGCTTCGTCACC-CGGTCGA 1049 Query 7092 TTGCCAGGTTCTCG---ATTTCATCGGCTTTTACGCAGCCGCCATAATACCGTTTGCCCG 7148 | || ||||||||| || || || | ||||||||| || || || ||||| Sbjct 1050 TCGCGAGGTTCTCGGCGATGTCGACGAACTG---GCAGCCGCCGTAGTAGCGGCGGCCCG 1106 Query 7149 GATATCCCTCAGCATACTTGTTGGTAAAAATAGAACCCTGTGC 7191 |||| ||||| || ||||||||||| | | || ||||| || Sbjct 1107 GATAGCCCTCGGCGTACTTGTTGGTCAGCACCGAGCCCTGCGC 1149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555250565401000