Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_005340.1 Length=30636 Score E Sequences producing significant alignments: (Bits) Value seq8309 134 3e-27 >seq8309 Length=800 Score = 134 bits (148), Expect = 3e-27 Identities = 266/389 (68%), Gaps = 10/389 (3%) Strand=Plus/Plus Query 15524 TCGGCCTGCGTGCTTACATCGACCAGACTGTCGGCTGGCACAAAACCCTGTCTAACGTTG 15583 |||||||||| || | ||||| || |||||||||||||| || | || ||||| | Sbjct 381 TCGGCCTGCGCGCCAAGCTCGACGAGGAAGTCGGCTGGCACAAGACGATCTCCAACGTCG 440 Query 15584 GTGTACAGGGCGTTACCGGCATCAGCGCC----TCAGTGTTCTGGGATTTGCAGGCATCC 15639 || | ||||| |||| | | | | |||| ||| | |||||| || Sbjct 441 CGGTCAACGGCGTCGTCGGCCTGACCCGCAAGATCAGC-TTC---GCCCTGCAGGACCCC 496 Query 15640 GGCACCGATGCTGACCTGCTCAACGAGGCCGGGGTTACAACGCTGGTACGCAAGGACGGT 15699 ||||| || | | | || |||| ||||| || || ||||| | ||| || |||| Sbjct 497 TCGACCGACGCCGGCGTCCTGAACGCCGCCGGCGTCACCGCGCTGATCCGCCAGAACGGC 556 Query 15700 TTCCGCTTCTGGGGTAACCGCACCTGCTCGGATGACCCGCTTTTTCTGTTTGAGAACTAC 15759 |||||||||||||| |||| |||||||| || || ||| || | ||| || | | | Sbjct 557 TTCCGCTTCTGGGGCAACCAGACCTGCTCTGACGAGCCGGCCTTCCAGTTCGAAAGCGCC 616 Query 15760 ACTCGCACCGCGCAGGTACTGGCCGACACGATGGCCGAGGCGCA-CATGTGGGCGGTCGA 15818 | |||||||| | | || ||||| || ||||||| ||| |||||||||||||| Sbjct 617 GCCCGCACCGCCGACATCCTCAAGGACACCATCGCCGAGG-GCATGATGTGGGCGGTCGA 675 Query 15819 CAAGCCCATTACCGCCACGCTCATTCGTGACATTGTTGACGGCATTAACGCCAAATTCCG 15878 |||||| | || ||| || || ||||| | || ||| |||||||| ||||| Sbjct 676 CAAGCCGCTGACGCCCAGCCTGGCGCGCGACATCATCGAGACCATCAACGCCAAGTTCCG 735 Query 15879 CGAGCTGAAATCAAACGGCTACATCGTGG 15907 | ||||||| | ||||||||| ||| Sbjct 736 CCAGCTGAAGGTCCAGGGCTACATCCTGG 764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97894734803100