Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq14742 580 1e-160 >seq14742 Length=52551 Score = 580 bits (642), Expect = 1e-160 Identities = 743/1019 (73%), Gaps = 4/1019 (0%) Strand=Plus/Plus Query 137861 ATGGTTCGATGTCTTGGATGACTGGATTAAACGAGATCGCTTTGTATTTGTGGGTTGGTC 137920 |||||| |||| | ||||||||| | | ||| || ||||||||||| |||||||| Sbjct 37758 ATGGTTTGATGACGCAGATGACTGGTTACGTCAAGACCGTTTTGTATTTGTAGGTTGGTC 37817 Query 137921 TGGACTACTACTTTTTCCCACTGCTTATTTGGCCCTTGGTGGCTGGCTTACTGGCACAAC 137980 || || || ||||| || ||||||||| || ||||| || ||| ||||||| ||||| Sbjct 37818 AGGTCTTCTTCTTTTCCCTTGTGCTTATTTTGCACTTGGAGGTTGGTTTACTGGTACAAC 37877 Query 137981 GTTTGTTACAAGCTGGTACACCCACGGGTTGGCGTCTAGTTATCTTGAAGGCGCTAATTT 138040 ||||| ||| |||||||| || || || || ||| ||| | ||||| ||| || Sbjct 37878 TTTTGTAACATCATGGTACACACATGGTTTAGCTTCTTCATATTTAGAAGGTTGTAACTT 37937 Query 138041 CCTCACAGCAGCTGTTTCGACTCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTT-T 138099 | | |||||||||||||| |||||||| | ||||| ||| ||| || || | ||| | Sbjct 37938 CTTAACAGCAGCTGTTTCAACTCCTGCAAACAGTATGGCTCACTCT-TTATTATTCTTAT 37996 Query 138100 GGGGTCCTGAGTCTCAAGGAGATATCGTCCGCTGGTTCCAACTTGGGGGACTCTGGACTT 138159 |||| ||||| | ||||| || | || |||| ||| | || || || ||||| | Sbjct 37997 GGGGACCTGAAGCACAAGGTGACTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGACAT 38056 Query 138160 TTGTGGCGCTCCACGGGGCCTTTAGTCTGATTGGATTCATGCTTCGCCAGTTTGAGATCT 138219 || | || | || || | || || | |||||||| ||| | || || ||||| || Sbjct 38057 TTATTGCTTTACATGGATCTTTCGGTTTAATTGGATTTATGTTACGTCAATTTGAAATTG 38116 Query 138220 CTCGTCTGGTAGGCATCCGTCCCTACAACGCAATCGCATTCTCTGGTCCCATCGCTGTGT 138279 ||||| || | ||||| ||||| || || || ||||| | || || | || | Sbjct 38117 CTCGTTCAGTTAATTTACGTCCATACAATGCTATTGCTTTCTCGGCGCCTATTTCAGTTT 38176 Query 138280 TCGTCAGCGTGTTCCTGATGTATCCTTTGGGTCAATCCAGTTGGTTCTTTGCTCCCTCCT 138339 | || || ||| | || || || || || ||||| | ||||| |||||||| | Sbjct 38177 TTGTTTCAGTTTTCTTAATTTACCCATTAGGACAATCTGGCTGGTTTTTTGCTCCTAGTT 38236 Query 138340 TTGGTGTGGCAGCAATCTTCCGATTCCTGTTGTTCCTTCAGGGTTTCCATAACTGGACCC 138399 ||||||| ||||| || ||||| ||| | || || | || || |||||||||||||| Sbjct 38237 TTGGTGTAGCAGCTATTTTCCGTTTCATTTTATTTTTCCAAGGCTTCCATAACTGGACTT 38296 Query 138400 TCAACCCCTTTCATATGATGGGCGTAGCAGGTATTCTTGGTGGTGCTCTGCTCTGTGCTA 138459 | ||||| || || |||||||| ||||||||| || | || | |||||| | ||||||| Sbjct 38297 TAAACCCATTCCACATGATGGGTGTAGCAGGTGTTTTAGGAGCTGCTCTATTATGTGCTA 38356 Query 138460 TTCATGGTGCTACAGTAGAAAATACTTTGTATGAAGATGGCGAACAATCAAATACTTTTA 138519 |||| |||||||| || ||||| || || | ||||||||| || | || || || Sbjct 38357 TTCACGGTGCTACTGTTGAAAACACATTATTTGAAGATGGTGACGGTGCTAACACATTCC 38416 Query 138520 AAGCATTTGAACCTACTCAAGAAGAAGAAACCTATTCAATGGTTACTGCTAACCGTTACT 138579 |||||| | || || |||| |||||||| || |||||||| || || ||||||| || Sbjct 38417 GTGCATTTAACCCAACACAAGCTGAAGAAACTTACTCAATGGTAACAGCGAACCGTTTCT 38476 Query 138580 GGTCGCAAATCTTTGGAATTGCTTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGCTCT 138639 |||| ||||| ||||| ||||||| ||||| ||||||||||||||||| ||||| Sbjct 38477 GGTCTCAAATTTTTGGGGTTGCTTTCTCAAATAAACGTTGGCTTCACTTCTTCATGCTTC 38536 Query 138640 TTGTTCCCGTCATGGGTCTCTGGACTAGTAG-TATTGGTATTATTGGTCTTGCTCTTAAC 138698 ||||||| || | ||||| |||| | || ||||||| | |||| | ||| | || Sbjct 38537 TTGTTCCTGTTGTAGGTCTTTGGA-TGTCAGCTATTGGTGTAGTTGGGTTAGCTTTAAAT 38595 Query 138699 CTACGAGCGTATGATTTCGTATCGCAAGAAATTCGTGCAGCAGAAGATCCTGAATTCGAG 138758 |||| || ||||| ||||| || ||||||||||||||||| || ||||| |||||||| Sbjct 38596 TTACGTGCTTATGACTTCGTTTCACAAGAAATTCGTGCAGCTGAGGATCCGGAATTCGAA 38655 Query 138759 ACCTTCTACACCAAGAACATTCTTCTGAATGAAGGTCTGCGTGCCTGGATGGCTCCTGTG 138818 || |||||||| || || ||| || | ||||||||| | ||||| ||||||||| | Sbjct 38656 ACTTTCTACACAAAAAATATTATTTTAAATGAAGGTATCCGTGCTTGGATGGCTGCGCAA 38715 Query 138819 GATCAACCTCACGAAAACTTTGTTTTTCCTGAAGAAGTATTGCCAAGAGGCAACGCTCT 138877 || ||||| || ||| |||| || |||||||||||||| || | || || ||||| Sbjct 38716 GACCAACCACATGAACGTCTTGTATTCCCTGAAGAAGTATTACCTCGTGGTAATGCTCT 38774 Score = 280 bits (310), Expect = 2e-70 Identities = 271/348 (78%), Gaps = 0/348 (0%) Strand=Plus/Minus Query 135878 GTTTTCCAGGCAGAACACAACATTCTCATGCATCCTTTCCACATGTTGGGAGTTGCTGGG 135937 |||||||| || || ||||||||||| ||||| || ||||||||||| || |||||||| Sbjct 9281 GTTTTCCAAGCTGAGCACAACATTCTTATGCACCCATTCCACATGTTAGGTGTTGCTGGT 9222 Query 135938 GTCTTCGGTGGTTCTCTGTTCTCTGCTATGCATGGATCTCTTGTCACCTCTAGTCTTGTA 135997 || || |||||||| | |||||||| ||||| || || | || || || | | | Sbjct 9221 GTATTTGGTGGTTCATTATTCTCTGCAATGCACGGTTCATTAGTAACTTCATCTTTAATC 9162 Query 135998 CGTGAGACGACTGAGGTAGAATCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAG 136057 ||||| || ||||| ||||| ||| | || ||||| ||||||||||||||||| Sbjct 9161 CGTGAAACTACTGAAAACGAATCTGCTAACGAAGGATACAAATTCGGTCAAGAAGAAGAA 9102 Query 136058 ACTTACAACATTGTTGCTGCTCATGGTTACTTCGGTCGTCTGATCTTCCAATATGCGTCG 136117 || ||||||||||| ||||| ||||||||||| || ||| | ||||||||||| || || Sbjct 9101 ACATACAACATTGTAGCTGCACATGGTTACTTTGGACGTTTAATCTTCCAATACGCTTCT 9042 Query 136118 TTCAACAACTCTCGTTCGCTACACTTTTTCCTTGCTGCTTGGCCTGTTGTCGGTATCTGG 136177 ||||||||||||||||| ||||||| ||| | ||||||||||| || || ||||| ||| Sbjct 9041 TTCAACAACTCTCGTTCATTACACTTCTTCTTAGCTGCTTGGCCAGTAGTTGGTATTTGG 8982 Query 136178 TTTGCTGCCCTGGGCGTATCTACGATGGCGTTCAACCTCAATGGATTC 136225 || |||| | || | || || ||||| |||||| | || |||||| Sbjct 8981 TTCACTGCTTTAGGTATTTCAACTATGGCATTCAACTTAAACGGATTC 8934 Score = 235 bits (260), Expect = 7e-57 Identities = 283/382 (74%), Gaps = 2/382 (1%) Strand=Plus/Minus Query 135364 TTGGGAACAGTTCTGCGAGTGGGTTACCAGCACCGACAACCGCCTCTATGTGGGTTGGTT 135423 ||||| || || || || ||| |||| || || || ||||| | || | |||||||| Sbjct 12281 TTGGGCACGTTTTTGTGAATGGATTACTAGTACTGAAAACCGTTTATACATCGGTTGGTT 12222 Query 135424 TGGAACGCTGATGATTCCTACTCTTCTCGCAGCTGCTATCTGCTTT-ATTGTTGCTTTCA 135482 || | ||||| ||||| | | ||||| || |||| || || | ||||||| Sbjct 12221 CGGTGTTATCATGATCCCTACATTATTAACAGCTACT-TCTGTATTCATCATCGCTTTCA 12163 Query 135483 TCGCTGCACCTCCCGTCGATATTGACGGCATCCGCGAACCTGTTGCTGGTTCTCTAATGT 135542 ||||||||||||| || ||||| || || || || || || ||| ||||||| || | | Sbjct 12162 TCGCTGCACCTCCAGTTGATATCGATGGTATTCGTGAGCCAGTTTCTGGTTCATTATTAT 12103 Query 135543 ACGGAAATAACATCATCTCTGGTGCTGTTATCCCTTCTAGCAACGCCATCGGCCTTCACT 135602 ||||||| ||||||||||||||||||||| | ||| | ||||| || || | || | Sbjct 12102 ACGGAAACAACATCATCTCTGGTGCTGTTGTTCCTACATCAAACGCTATTGGTTTACATT 12043 Query 135603 TCTATCCCATCTGGGAAGCTGCTTCTCTTGATGAGTGGCTATATAATGGTGGTCCTTATC 135662 |||| || || ||||||||| | ||| | ||||||||| |||| || ||||||||||| | Sbjct 12042 TCTACCCAATTTGGGAAGCTTCATCTTTAGATGAGTGGTTATACAACGGTGGTCCTTACC 11983 Query 135663 AACTAGTGGTCTTCCACTTCCTTATCGGTGTCTTCTCTTACATGGGTCGCGAGTGGGAAC 135722 || || | || | ||||||| | | ||| | | || ||||||||||| || |||||| Sbjct 11982 AATTAATCGTTTGCCACTTCTTCTTAGGTATTTGCTGCTACATGGGTCGTGAATGGGAAT 11923 Query 135723 TCTCTTACCGACTGGGTATGCG 135744 | |||||||| | |||||||| Sbjct 11922 TATCTTACCGTTTAGGTATGCG 11901 Score = 127 bits (140), Expect = 3e-24 Identities = 109/135 (81%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 135740 ATGCGCCCTTGGATTTGTGTCGCTTACTCAGCCCCTGTTGCCGCTGCTACTGCTGTTTTC 135799 ||||| ||||||||| ||| |||||||| || || ||||| ||||||||||| || ||| Sbjct 10477 ATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCAGTTGCAGCTGCTACTGCAGTATTC 10418 Query 135800 CTGGTCTACCCCTTTGGACAAGGTTCTTTCAGTGATGGTATGCCGCTTGGCATTTCTGGA 135859 | |||| || | ||||||||||||||| |||||||||||| | || || |||||| Sbjct 10417 ATCATCTATCCTATCGGACAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTATCTCTGGA 10358 Query 135860 ACTTTTAACTACATG 135874 ||||| |||| |||| Sbjct 10357 ACTTTCAACTTCATG 10343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627840640240000