Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq3654 138 3e-27 >seq3654 Length=3311 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 |||||| |||| |||||||| | | || | |||||||| ||||||| ||||| ||| Sbjct 1110 GCACAGCAGCTGTGGTTTGCTGTTCTTGAGGCACAGATTGAAACAGGAAACCCCTACATG 1051 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 ||||||| ||| | ||||||||||| |||||||||| |||| || ||||| || Sbjct 1050 CTGTACAAGGATGCTTGCAACCGCAAAAGCAACCAGCAGAACCTGGGCACAATCAAGTGC 991 Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAAC 364290 |||||||| || || |||||| | || |||||| || || |||||||| || || ||| Sbjct 990 AGCAACCTGTGCACTGAGATTGTGGAGTACACCAGCCCAGATGAGACTGCGGTGTGCAAC 931 Query 364291 CTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319 | || || || || || || |||||| Sbjct 930 TTGGCATCCATTGCCCTACCACGGTTTGT 902 Score = 95.1 bits (104), Expect = 3e-14 Identities = 166/238 (70%), Gaps = 4/238 (2%) Strand=Plus/Minus Query 363817 CAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGAT 363876 ||||| || || |||||||| || || || || || ||| | ||||| || || || Sbjct 1581 CAGGGCGGTGGCAAGCGCAAGGGTGCCTTCGCCATCTATATTGAGCCCTGGCACGCAGAC 1522 Query 363877 ATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGAT 363936 || ||||| || ||||| || || || ||| || || ||||| ||||| |||||| Sbjct 1521 ATCTTTGACTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGAACCGTGCCCGTGAT 1462 Query 363937 CTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGG--TAAGA 363994 |||||||||| || ||| | ||| | || |||||||| ||||| ||||| ||| Sbjct 1461 CTGTTCTATGGCCTCTGGATCAATGATCTGTTCATGAAGCGAGTGGA-GCAGGACCAAG- 1404 Query 363995 ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGA 364052 | ||| || || ||||| | || |||||| || | || || ||||| || || Sbjct 1403 ACTGGAGTCTGTTCTGCCCCAATGAGGCTCCAGGCCTGGCAGAGGTCTGGGGAGAGGA 1346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303082655187950