Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_007497.1 Length=44856 Score E Sequences producing significant alignments: (Bits) Value seq11925 197 4e-46 >seq11925 Length=6573 Score = 197 bits (218), Expect = 4e-46 Identities = 474/698 (68%), Gaps = 38/698 (5%) Strand=Plus/Minus Query 39258 GCAGGCCGCCGCCGACGCGCTTCGTCGTGTAGAACAGTACGTACGGCTTCGCCGTGTACG 39317 ||| ||||||||||||||||||||||||||||||||| ||||| |||||||||| || | Sbjct 4505 GCACGCCGCCGCCGACGCGCTTCGTCGTGTAGAACAGCACGTAGGGCTTCGCCGACTAGG 4446 Query 39318 GATCGCGCAGCACGCGAACCCCGATGCGGTCGATGATCAGATA-CGTCTGCTGGAAGTCG 39376 | ||||||||||| || ||||| ||||||| || |||| | | || |||||||| Sbjct 4445 GGTCGCGCAGCACCCGCACCCCCGCCCGGTCGACGACGAGATCGCCGCGGC-GGAAGTCG 4387 Query 39377 CCGAAGAGAATCGGCGTCGAGTTCGCCGCCACATCCGGCATGTCCGGCACCTCGGTAACC 39436 |||||| |||| | | | ||||||||| | |||||||| ||| |||||||| || Sbjct 4386 CCGAAGCCGATCGCCATGGCGTTCGCCGCGATGTCCGGCATCTCCTCCACCTCGGCGACG 4327 Query 39437 GGATAGCCCGCCAGCGTCGC-CGGCTGCCCCGCTACGTACGACGGTTGCCAGAGATAGTT 39495 | || | ||| | || |||| | ||||| | | ||| |||||||||||||| Sbjct 4326 GCGAAGTTCATCAGGCTGGCGCGGCCG-CCCGCGGCCGCTGGCGGCTGCCAGAGATAGTT 4268 Query 39496 CCCTTGGCCGTCCTTCAGCTTCCGCACCTGACG-CTGCGTGTTGCGGTTCATCGCGAAGC 39554 || | | ||||||||||||| || | | | || ||| ||| |||||||||| ||||| Sbjct 4267 GCCGTCGGCGTCCTTCAGCTTGCGGATC-GCCGCCTGGGTGCGGCGGTTCATCACGAAGG 4209 Query 39555 GGGCGTTGCCCGTGAACGC--GCTCGGCAGGTCGTAGACCAGATCGATGATGCCGTCCGA 39612 ||| || | | || || ||| |||| ||||||| || ||||| | | ||| || Sbjct 4208 TGGCATT-CTGGCGATAGCCGGCT-TTCAGGGCGTAGACGAGGTCGATCAGCCGGTCGGA 4151 Query 39613 CGTGATGTCTGCCGCCGCA-CCGCTGTTCACGACTTCGATGGCGCCGAACGGGTGCTTCG 39671 || | || || || || | ||| | | || || | ||| || | | |||| | Sbjct 4150 CGGGTTG-CTCGCGGCGAAGGCGCCGGCCGCG---CCGCTCGCGACGTAGCCGAGCTT-G 4096 Query 39672 CGGCA-------TTGGCACCG---CCCGCGATGTACGTAAGCAGCCCGTTCGGCTTGTTC 39721 | || | ||| || ||||| | || || | ||| ||||| ||| Sbjct 4095 CCCCACTCCCAGTCGGCCTCGGCCACCGCGTCGACCGCGAGGAAGCCGGTCGGCCGGTTG 4036 Query 39722 GTGCCGTCGCCAGCGAGGAACGCTTTGCCTTCCTGCTTGGCGAACTCGGTCTGCACTTCG 39781 |||||| ||| | | ||| || || |||||| ||||| |||||| || ||| Sbjct 4035 CTGCCGTTGCCCGTCACGAAGGCCGCCCCCTCCTGCAGCGCGAAGGCGGTCTCGACCTCG 3976 Query 39782 GTCGCGAGCCACGACTCGAGATCGATTTCCGCGTCGTCGAGGATCTGCTGCGTAGCAGCC 39841 |||||||| | |||| |||| | ||||||||||| | | |||||| || ||| Sbjct 3975 TCGGCGAGCCAGGCGTCGACGTCGACCACGGCGTCGTCGAGCAGCGTCTGCGTCGCCGCC 3916 Query 39842 GGGTTCGCATAGA----TTTCGCCCGAT--GCGAAGCTCAGCGGCTGGAACGTAGCCGCG 39895 || | || |||| ||||| ||| ||| ||||| || || ||| | || | Sbjct 3915 GGCATGGCGTAGAGCTCCATCGCCGGATAAGCG-AGCTCGGC-----GAGCGTGGGCGAG 3862 Query 39896 TTGGTCTGCGGACGCTGGCTTGCTTCGCCGACCCAGCC 39933 |||||||| ||| | |||||||||||||| Sbjct 3861 GCCGTCTGCGGCCGCGCCGCCGTCTCGCCGACCCAGCC 3824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143389967462100