Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq9159 89.7 6e-13 >seq9159 Length=2836 Score = 89.7 bits (98), Expect = 6e-13 Identities = 125/173 (72%), Gaps = 2/173 (1%) Strand=Plus/Minus Query 93081 TGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGAT-ATCAACTCATTG 93139 |||||| ||||| | ||||| ||||| || || || |||| || | || | ||||||| Sbjct 1252 TGTACAACAAGCAGCCGAAGTCTGTATGCAATCCCTCATCTC-TGCTGATGAGCTCATTG 1194 Query 93140 CTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA 93199 ||||| || | || || | || || || ||||||||||| || || | | || || Sbjct 1193 CTGAAGGTGAGGCCAGGCATCAAGCCACGCTTCTTGAGCCAGAAGATGGCACAGAAGCTG 1134 Query 93200 CCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAA 93252 || || || || || || ||||| || ||| ||||||| | || |||||||| Sbjct 1133 CCTGAGAAGAAGATGCCCTCCACAGCAGCATATGCCACCAAGCGCTCGGCAAA 1081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556747861669000