Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_009447.1 Length=52414 Score E Sequences producing significant alignments: (Bits) Value seq1610 91.5 5e-14 seq12810 87.8 6e-13 >seq1610 Length=2435 Score = 91.5 bits (100), Expect = 5e-14 Identities = 183/268 (68%), Gaps = 9/268 (3%) Strand=Plus/Plus Query 29480 GAGCTTCGAAATACCGACGACTTTGCCGCTCGGGATATAGCCGATATGGGCCGTTCCCAT 29539 |||||| || | || ||||| |||||||| |||||||| || ||| | || || Sbjct 2013 GAGCTTGGAGAGCCCCACGACGCCCTCGCTCGGGTAGTAGCCGATGTGCGCCTTGCCGAT 2072 Query 29540 GATCGCCGCCATATGGTGTTCGCAGTGCGAATAGATCGGGATATCGCGAACGATAATCCA 29599 || || | |||| ||||| ||||||||||| ||| |||||| ||||| |||| || Sbjct 2073 GAACGGCACCATGTGGTGCTCGCAGTGCGAGAAGAACGGGATGTCGCGCACGAGGATGAT 2132 Query 29600 GTCGTCGGAGCCTTCCGCGCCATCCTCGAACACCTTG---AGCACTTCGGCCGGGTCGTG 29656 ||||||| ||| | || | |||| ||| | |||| || ||||| ||| | Sbjct 2133 GTCGTCGTAGC---CGCCGACCTCCTGGAAGGTGCGGGCCAGCATCTCCGCCGGATCGCG 2189 Query 29657 CATATAGCCCGCCGCCCATGACGACAACCACGCCTTGACGACTCGCTTCGGCGTTTCGCG 29716 |||| |||||| || || || | |||||| |||| ||| || || ||| Sbjct 2190 GCCATAG-CCGCCGAACAGCTCGCCA--TAGGCCTTGGCGACGCGCGCAGGGGTGTCGAC 2246 Query 29717 CAAGCCTTCGCGGTCGATGTCTTCGCCG 29744 | ||| ||||||||| ||| |||||| Sbjct 2247 GAGGCCCTCGCGGTCGGGGTCGTCGCCG 2274 >seq12810 Length=625 Score = 87.8 bits (96), Expect = 6e-13 Identities = 122/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 29414 CGCGATCTGGTTCGTCAGGCGCTCTTGAACTTGCAGGCGCTTGGCGAAAATGTCTGCCAG 29473 ||||| || | || || ||||| || | |||| ||| | |||||| || || Sbjct 198 CGCGACCTCGGCGGTGAGCCGCTCCTGGATCTGCAAGCGGTGGGCGAAGCCGTGGAGCAC 139 Query 29474 CCGCTTGAGCTTCGAAATACCGACGACTTTGCCGCTCGGGATATAGCCGATATGGGCCGT 29533 ||| ||||||||| || |||||||| | | | |||| | |||| |||| || || Sbjct 138 GCGCGCGAGCTTCGAGATGCCGACGACGTGGTCCTTCGGCAGATAGGCGATGTGCGCTCG 79 Query 29534 TCCCATGATCGCCGCCATATGGTGTTCGCAGTGCGAATAGATCGGGATATC 29584 || ||||||| |||||| || |||||||||||||| | || |||||| || Sbjct 78 GCCGATGATCGGCGCCATGTGATGTTCGCAGTGCGACTGGAACGGGATGTC 28 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167570907577200