Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq13239 280 7e-71 seq106 264 5e-66 >seq13239 Length=1369 Score = 280 bits (310), Expect = 7e-71 Identities = 482/694 (69%), Gaps = 17/694 (2%) Strand=Plus/Minus Query 65919 ACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGCCGGGTA 65978 ||||||||| | | || ||| ||| ||||||||||| || | || | |||||| || Sbjct 713 ACCGGCTCGCTCGGGCTCGACATCGCGCTCGGCATCGGCGGCTTGCCCAAGGGCCGCGTG 654 Query 65979 GTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCGGTGGCC 66038 | ||| |||| || || || || || ||| | ||| | ||||| | | ||| Sbjct 653 ATCGAGGTCTATGGCCCGGAAAGCTCGGGCAAGACGACGCTCGCGCTCCATGTCATCGCC 594 Query 66039 AATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTCGACCCT 66098 | || |||||||| || |||| ||| |||| | |||| ||||||||| | ||||| || Sbjct 593 GAGGCGCAGAAGGCGGGCGGCACCGCGGCCTTCGTCGATGCCGAACATGCGCTCGATCCG 534 Query 66099 GAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCAGACACT 66158 | || ||| | ||||||||| || ||||| | || | ||| |||||| ||||| Sbjct 533 GTCTATGCCAAGAAGCTCGGGGTCGACATCGACGAGCTGATCGTTTCGCAGCCCGACACC 474 Query 66159 GGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCCATCATC 66218 ||||| ||||| || |||||| ||| || || || || | | | | | Sbjct 473 GGCGAACAGGCGCTCGAGATCACCGACACGCTGGTGCGCTCGAACGCGATCGACGTGCTG 414 Query 66219 GTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATCGGGGAC 66278 || || ||||| |||||||| ||||||||||| || ||| |||| || || || || || Sbjct 413 GTGGTCGACTCGGTGGCGGCGCTGGTGCCGCGCGCCGAGATCGAGGGCGAGATGGGCGAT 354 Query 66279 TCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACCGGCACG 66338 ||||||||||||||||| ||||| |||||| ||| | ||||||||||||||||| || Sbjct 353 TCGCACGTCGGCCTGCAGGCCCGGCTGATGAGCCAGTCGCTGCGCAAGCTGACCGGCTCG 294 Query 66339 ATTGCCAGCACCAA---CACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGATCGGC 66395 || | || | || || | | | | | | || ||||||||| |||| |||| Sbjct 293 ATCAACCGCTCGAAGTGCATGGTGA---TCTTCATCAACCAGCTGCGCATGAAGCTCGG- 238 Query 66396 AACGTGGGCTACGGCCCGAAT---GAGACCACCACCGGTGGTAAGGCTCTGCGCTTCTAC 66452 ||| |||||| ||| |||||||| ||||| || || || || ||||| Sbjct 237 --GGTGATGTACGGC---AATCCCGAGACCACGACCGGCGGCAACGCACTCAAGTTCTAT 183 Query 66453 GCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGA-GAAGGAAGGCGATGAGGCTGT 66511 || ||||| | || ||||| | | || | | || ||||| |||| ||| | Sbjct 182 GCGAGCGTGCGGCTCGACATCCGCCGCACCGGC-CAGATCAAGGACCGCGACGAGATCAT 124 Query 66512 CGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCAGGC 66571 ||||||| ||||||||||||||| |||||||||||| | ||||| || | |||| Sbjct 123 CGGCAACACCACGCGCGTGAAGGTGGTCAAGAACAAGGTCGCGCCGCCCTTCAAGCAGGT 64 Query 66572 TGAGTTTTCCATCGTCTACGGCGAGGGCATTTCC 66605 ||||| |||| | |||||||||||||| ||| Sbjct 63 CGAGTTCGACATCATGTACGGCGAGGGCATCTCC 30 >seq106 Length=4709 Score = 264 bits (292), Expect = 5e-66 Identities = 517/760 (68%), Gaps = 13/760 (2%) Strand=Plus/Minus Query 65917 CCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGCCGGG 65976 |||| |||||| | | || ||| ||| ||||||||||| ||| ||| | || || Sbjct 3597 CCACGGGCTCGCTCGGGCTCGACATCGCGCTCGGCATCGGCGGGCTGCCGCGCGGGCGCA 3538 Query 65977 TAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCGGTGG 66036 | || ||||||||||| || || || || || ||| | ||| | || || |||||| Sbjct 3537 TCGTCGAGATCTACGGGCCGGAATCCTCCGGCAAGACCACGCTCGCGCTGCATACGGTGG 3478 Query 66037 CCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTCGACC 66096 || | || |||||| ||| |||| | ||||| |||||||||||| || | ||||||| Sbjct 3477 CCGAGGCGCAGAAGCGCGGCGGCATCTGCGCCTTCATCGACGCCGAGCACGCGCTCGACC 3418 Query 66097 CTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCAGACA 66156 | |||||| |||||| || | ||||| | ||| || | |||||| ||| Sbjct 3417 CGATCTACGCCCGCAAGCTCGGCGTCAACCTCGACGACCTCCTGATCTCGCAGCCGGACG 3358 Query 66157 CTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCCATCA 66216 | ||||||||||| || |||||| ||| || || || || | || | | Sbjct 3357 CCGGCGAGCAGGCGCTCGAGATCTGCGACACGCTGGTGCGCTCGGGTGCCGTCGACGTGC 3298 Query 66217 TCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATCGGGG 66276 |||| || || || || ||||| ||| ||||||||| |||||||| || || || || | Sbjct 3297 TCGTCGTCGATTCGGTCGCGGCGCTGACGCCGCGGGCCGAGCTCGAGGGCGAGATGGGTG 3238 Query 66277 ACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACCGGCA 66336 | |||| ||||||||| || ||||||||| ||||| |||||||||| |||| | Sbjct 3237 ATTCGCTGCCCGGCCTGCAGGCGCGCCTGATGAGCCAGGCGCTGCGCAAGCTCACCGCCT 3178 Query 66337 CGATTGCCAGCACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGATCGGCA 66396 |||| | | | || || | | | | || ||| | || ||||||||| Sbjct 3177 CGATCTCGAAGTCGAAGACCATGGTGATCTTCATCAACCAGATCCGGATGAAGATCGG-- 3120 Query 66397 ACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTTCTACGCCT 66456 |||| | |||| ||||||||||| || || || || || |||||||||| Sbjct 3119 -CGTGATGTTCGGCAGCCCCGAGACCACCACGGGCGGCAACGCGCTCAAGTTCTACGCCT 3061 Query 66457 CGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCA 66516 | || || | || |||| | |||| | | |||| |||| |||| ||||||| Sbjct 3060 CCGTCCGCCTCGACATCCGTCGCATCGGCGCGATCAAGGCGCGCGACGAGGTCGTCGGCA 3001 Query 66517 ACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCAGGCTGAGT 66576 ||| || ||||| ||||| || ||||||||||| || || ||| |||| || |||| Sbjct 3000 ACCAGACCCGCGTCAAGGTGGTGAAGAACAAGCTCGCCCCGCCGTTCCGCGAGATCGAGT 2941 Query 66577 TTTCCATCGTCTACGGCGAGGGCATTTC-CCGCGAGGCTGAACTCCTCGACATGGCCGTT 66635 | |||| | |||||||||||||| || || ||| || ||| |||| | | ||| Sbjct 2940 TCGACATCATGTACGGCGAGGGCATCTCGAAGCTCGGC-GAGCTCGTCGATCTCGGCGT- 2883 Query 66636 TCCCGAGGGC----TCATCAAGAAGTCTGGGGCCTGGTTC 66671 | ||| | ||||| | ||||| || ||||||||| Sbjct 2882 ---CAAGGCCGGCATCATCGACAAGTCCGGCGCCTGGTTC 2846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242422453372700