Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_012743.2 Length=62715 Score E Sequences producing significant alignments: (Bits) Value seq9554 251 3e-62 seq15910 127 8e-25 seq12362 86.0 3e-12 >seq9554 Length=3714 Score = 251 bits (278), Expect = 3e-62 Identities = 1319/2045 (64%), Gaps = 83/2045 (4%) Strand=Plus/Plus Query 53843 CTGGATTTGGACGGA-CACGAAGCGCGCCGACCGGCTCGTCAACTACTACAACGAGAACT 53901 |||||| ||| | || | |||| || |||||||||| | | ||||||||||| | Sbjct 471 CTGGATCTGGTCCGATCCCGAA-CGGACCGACCGGCTTGCCCGGGACTACAACGAGCGGT 529 Query 53902 TCAACAACATCGCCCCGCGCCAGTTCGACGGCTCGCACCTGACGCTGCCGGGCGTGTCGC 53961 ||||||||||||| ||||| ||| ||||| ||||| ||| || |||| ||| Sbjct 530 TCAACAACATCGCACCGCGAAGTTTCAACGGCGATCACCTTCAGCTTCCAGGCGCCTCGG 589 Query 53962 TGCGCTTCGAC-CTGCGCGAGAACCAGAAGCGCGCCATCTGGCGCGGCATTCAGGAAGGC 54020 |||| | | || | | ||||||| |||| |||||||||| ||| || || Sbjct 590 -GCGCCTTTTCTCTTTATGGGCACCAGAAACGCGGCATCTGGCGCATCATCTCGGCGGGT 648 Query 54021 GATATGTACCTCGCGCACGCTGTCGGCGCGGGCAAGACGTTCACGATGATCGCGACCGGC 54080 | || ||||| ||||| |||||||| |||||||| | |||||| ||| | | | Sbjct 649 TCGACCTATCTCGCCCACGCCGTCGGCGCTGGCAAGACCATGACGATGGCGGCGGCAGTC 708 Query 54081 ATGGAGGAGCGCCGGCTGGGCCTGTCCAACAAGCCGATGTACGCGGTGCCGAACCACATG 54140 |||||| || ||||| || ||| | |||| ||||| | || || ||| Sbjct 709 ATGGAGCAGAAGCGGCTCGGGCTGATCGCCAAGGCGATGCTGGTCGTTCCCGGTCACTGC 768 Query 54141 CTGGCGCAATTCGCGCGCGAGTTTCTTGAGCTGTACCCGGCCGCGAACATCATGGTCGCG 54200 || ||||| ||||||||||| || | ||| |||||| |||| |||| | || || Sbjct 769 CTCGCGCAGGCGGCGCGCGAGTTCCTGGCGCTCTACCCGACCGCCCGCATCCTCGTTGCC 828 Query 54201 GACGAGCAGAATTTCCACACGCACAACCGCCGCCGGTTCGTCGCGCAGGCCGCGCTCAAC 54260 ||||| || ||| || | | || || | | ||| |||| | ||||| | Sbjct 829 GACGAAACCAACTTCACCAAGGATAAGCGACATCTCTTCCTCGCCCGCGCCGCCACGGCC 888 Query 54261 AACCCGGACGCGATCATCATCACGCACTCGGCGTTCGGTCGCATCGGCATGTCCGAC-GA 54319 || ||| |||||||||||||| || |||||||| | |||| ||| |||| | | Sbjct 889 AATTGGGATGCGATCATCATCACCCATTCGGCGTTTCGCTTCATCTCCAT-TCCGTCCGC 947 Query 54320 GTATGCGTCGCAGTTCATCAGCGACCAGATCGACGAGTG-GAAAACCGCGCTCGCCGAGA 54378 | | | |||| | ||| ||| || | || | ||| ||| ||| || || Sbjct 948 CTTCGAGCAGCAGATGATCCAGGACGAGTTGGAGCTTTACGAAGACCT-GCTGACCAAGG 1006 Query 54379 CGGACAAGAGCGACCGCATCACGCGTAAGCAGATCGAGCGCCGTATCGAGCAGCTCGAAC 54438 ||| ||||||| | | || |||| | | ||||| | | ||| |||| | Sbjct 1007 TCGACGGCGACGACCGCGTGTCCCGCAAGCGGCTTGAGCGGCTGAAGGAGGGGCTCAAGG 1066 Query 54439 GCCGGCTGGAGGCAAAGCAGGGCAACGAGAAG-AAGGACAAGGTGCTGTCGTTCGAGGAG 54497 ||||| || || || | ||| | | |||||| | | ||| | | ||| Sbjct 1067 AACGGCTCGAAGC---GCTCG----CGACACGCAAGGACGATCTTCTGACCATATCCGAG 1119 Query 54498 CTGGGCGTCGACCGCCTGTTCGTCGACGAGTTCCACGAATTCCGCAAACTCGACTTCGCG 54557 || ||| |||| | | ||||||||||| ||| || |||||||| ||| ||| || Sbjct 1120 CTCGGCATCGATCAGATCATCGTCGACGAGGCCCAGGAGTTCCGCAAGCTCTCCTTTGCC 1179 Query 54558 ACGCAGCAGGGCAA-CATCAAGGGCATCGACCCGGCCGGCTCGCAGCGCGCGATGGACCT 54616 || || || | | | | | ||||| |||| ||| |||||||||||| ||| |||||| Sbjct 1180 AC-CAACATGTCGAGCTTGAAGGGAGTCGATCCGAACGGCTCGCAGCGGGCGTGGGACCT 1238 Query 54617 GTTCATGAAGGCGCAATACCTGCGCTCGAAGAAGCCGGGCCGCGCGCTCGTCGCCGCGTC 54676 | | | ||| | | | | | | ||||| | ||||| ||||| || || || Sbjct 1239 ATACGTCAAGTCCCGCTTCGTTGAAACCAAGAACCTCGGCCGTGCGCTGGTGCTGGCCTC 1298 Query 54677 GGGCACGCCGATCACGAACACGATGGGCGAGCTGTTCACGGTGCAACGCTTCTTCCAGCC 54736 |||||| |||||||| |||||| | ||||| ||||| ||||||| ||||| || Sbjct 1299 GGGCACCCCGATCACCAACACGCTCGGCGAAATGTTCTCGGTGCAGCGCTTTCTCGGCAT 1358 Query 54737 CGAGCAGATGGCCGAGGACGGTCTGGACACGTTCGACGCGTGGGC---GAACCAGTACGG 54793 |||| | || ||| || ||| || |||||| || ||||| || || | ||| Sbjct 1359 CGAGGCGCTGAGGGAGCGTGGCCTGCACGAGTTCGATGCCTGGGCCTCGA--CATT-CGG 1415 Query 54794 CGACGTCGTGGCGGGCTTCGAGCAGAACGCGGCGGGCGGCTATGAAGTCG-TCAGCCGCT 54852 ||| || | | | |||||| | | ||||| || ||| || ||| |||| Sbjct 1416 CGATGTGACGACCGAACTCGAGCTTCAGCCATCGGGCAAGTAC-AAGCCGGTCACGCGCT 1474 Query 54853 TCGCGAAGTTCCAGAACGTGCCGGAGCTGATGCGCCGCGTGC-GCTCGTTCATGGACATC 54911 | || | ||| |||||||| ||||| || |||| || | |||| || |||| || Sbjct 1475 TTGCCACTTTCGTCAACGTGCCCGAGCTCAT-CGCCATGTTCCGCTCCTTTGCGGACGTC 1533 Query 54912 CTGACGAGCTCGCAGCTCTCGCAGTACGTCGACCGCCCGGCGATCGATGGCGGCGGCCGT 54971 || | | | | ||| || || | |||||| || |||| || Sbjct 1534 GTGTTGCCGGAGGATTTGCGGCAATATGTGAAGGTGCCGGCGGTCTCGACCGGCAAGCGC 1593 Query 54972 CAGGTCATGGTCACGCCGGAGCCGTTCGGC---TACAAGGCGTACCAGAAGGCGCTCGAG 55028 ||| ||| || | | || | ||||| || | | |||| ||||||| | |||||| Sbjct 1594 CAGATCA-GGAC-CTCCAG-GCCGTCCGCCGCTTTCAAGCGCTACCAGACCGTGCTCGAC 1650 Query 55029 CAGCGCATCACCGCGATCC-GCAACCGCAAGGGCCCGCCGAAGAAGGGCGAGGACATCAT 55087 ||| |||| |||||| | ||| | | ||||| || | || || || |||||| | Sbjct 1651 GCGCGTATCAAGGCGATCGAGGAACGGGAGGGGCCAGC-GCAGCCCGGAGATGACATCCT 1709 Query 55088 CCTGAACGTGATCGCGGACGGCCGTTTCTCCGCGATCGACATGCGCTTCGTTGACCC-GA 55146 ||| |||||| | |||||||| | |||||||||| |||| | || ||||| || Sbjct 1710 GCTGTCGGTGATCACCGACGGCCGCCACGCCGCGATCGATCTGCGTCTGGTCGACCCCGA 1769 Query 55147 CCGCGCCGAGCGACCCGAACAGCAAGCTGAACCAGATGATCG---ACGCCGTG---ATC- 55199 | | || ||| || ||| |||||| ||| | |||||| ||||| | ||| Sbjct 1770 CAATGGAGA-CGAGCCCGACAACAAGCTCAACGACCTGATCGGAAACGCCTTCCGCATCT 1828 Query 55200 -GCCGACTACCACGCGGCATCCGACTTCGAGTATTCGACGAACGGCAAGGTC---GACCC 55255 | || || | | | | |||| | | | | | ||| | | || | Sbjct 1829 GGTCGGAAACGTCACAGAAC---ACTTATCGCAAGC--CTGATGGCGATTGCTTTGAGCT 1883 Query 55256 GATCAAGGGCGCGTCGCACATCATCTTCACCGACATCGGGCTCGGCGAGCAGTCGGCGAA 55315 | | || || |||| || ||||| |||| |||| | || ||| || || || Sbjct 1884 GCCC---GGTGCCGCGCAGATGATCTTTTCCGATCTCGG-CACGATCAGC-GT-GGAAAA 1937 Query 55316 GAACCGCGGCTTCGA--CATGAAGGCGTGGATC-GAGAAGCGCCTGACGGACGGCGGCGT 55372 |||| | || ||| | | | || |||||| | || | || || | || ||||| Sbjct 1938 GAACAGGGGGTTCTCTGCCT-ACCGC-TGGATCCGCGACGAGCTTGTGCGCAGG-GGCGT 1994 Query 55373 GCCGCGCGA-GCAGATCGCGTTCATGCGCGACAACAAGGAGCACGC-GAAGAAGGAGCGC 55430 ||| ||| | | ||||| ||||||| || ||| | || ||| | ||| ||||| Sbjct 1995 CCCG-GCGTCGGAAATCGCCTTCATGCAGGATTACA-GATGCGCGCAGGCCAAGCAGCGC 2052 Query 55431 CTGTTCGCGGACATGCGCGAGGGCAAAAAGCGCGTGCTGATCGGCGGCAAGGA---CATG 55487 ||||||| ||| | | ||||| || | ||||||||| ||| |||| Sbjct 2053 CTGTTCGGTGACGTCAATGCCGGCAAGGTCCGGTTCCTGATCGGCTCGTCGGAAACCATG 2112 Query 55488 GAAACCGGCGTCAACGTGCAGAAGCGCCTCTACACCGAGGAGCATCTGGACGCGCCGTGG 55547 | ||||||||||||| ||| ||||||| | | | | || || |||| ||| ||| Sbjct 2113 GGCACCGGCGTCAACGCCCAGCTGCGCCTCAAGGCGCTGCATCACCTTGACGTGCCTTGG 2172 Query 55548 TTCCCGGCATCCGTCGAGCAGCGCGAGGGCCGCATCATCCGTCAGGGCAACCAGAACAAG 55607 | || | |||||||||| ||||| |||||| ||| |||||||| ||| | | Sbjct 2173 CTGCCCTCGCAAATCGAGCAGCGTGAGGGGCGCATCGGCCGGCAGGGCAATCAGCATGAC 2232 Query 55608 CAGGTGCGCATCCGCGCGTGGGCGAC-GAAGGGCAGCTACGACTCGACCATGTGGGGGAT 55666 || | ||| ||| | ||||| ||||| ||| |||| | ||||||||| || Sbjct 2233 GAGATCGATATCTTCGCCTATGCGACGGAAGGCTCGCT-CGACGCCACCATGTGGCAGAA 2291 Query 55667 GAACGCCCGCAAGGCCCGCTTCATCGAACAGGCGCTCAACGGCGACGACAGCG-TGCGCT 55725 |||| ||||||||||||||||||| ||| || ||||||| || || | ||| Sbjct 2292 CAACGAGCGCAAGGCCCGCTTCATCGCCGCGGCCCTTTCCGGCGAC-ACCTCGATCCGCA 2350 Query 55726 CGCTCGAGGACGTGTCCGAGGCATCGGC------GTTCGACATGGCCGCCGCGCTGGCGT 55779 |||||||||| || ||||| ||| ||||| ||||||| ||| | |||| Sbjct 2351 GGCTCGAGGACATGGGCGAGGGCCAGGCCAACCAGTTCGCCATGGCCAAGGCGATCGCGT 2410 Query 55780 CGGGCGACGAGCGCTATCTGAAGATGGCCGGCCTGAAGGCCGACGTCGAGCGCCTGGAGC 55839 |||||||| |||| || ||| ||| || || | ||||| ||| || ||||||| Sbjct 2411 CGGGCGACCCGCGCCTGATGCAGAAGGCGGGGCTCGAAGCCGAAATCGCCCGGCTGGAGC 2470 Query 55840 GCCTG 55844 ||||| Sbjct 2471 GCCTG 2475 >seq15910 Length=10648 Score = 127 bits (140), Expect = 8e-25 Identities = 387/582 (66%), Gaps = 27/582 (5%) Strand=Plus/Minus Query 51897 ACGCAGTACGCGCACTACACCAGCGAGGGCGTGATCCGCTCGATCTACGACGGCCTGCGC 51956 |||||||||||||| | ||| ||| | | |||| | |||| ||| ||| Sbjct 1507 ACGCAGTACGCGCATTTCACGCCCGAATTCATCGTCCGGGCCATCTGGTCGGGCTTGCTG 1448 Query 51957 CGCCTGGGCTTTGCCGGCGGCAAGGTGCTCGAGCCGGGCATGGGTATCGGCCTGTTCAAG 52016 || || |||| ||||||| ||||||||| || ||||| || | || ||||| Sbjct 1447 CGGCTCGGCTGGCGCGGCGGCCGGGTGCTCGAACCTGGCATCGGCACGGGGCTGTTTCCC 1388 Query 52017 GGGCTGATGCCCGACAGCATGGCCGCGACCAGCCAGTACACGGGCGTCGAGTACGACGCG 52076 | |||||||| ||| | || | || |||||| ||| ||||||||| ||| || Sbjct 1387 GCCCTGATGCCAGACGACCTGCGCCCGGTCAGCCATGTCACCGGCGTCGAGCTGGACCCG 1328 Query 52077 CTGACCGGCGCG-ATCGCGAAGCTGCTGTATCCGCAGAGCAACATCATCGTC---GGCGA 52132 | |||| |||| ||||| ||||| | || | || | ||||||| ||||| Sbjct 1327 GTTACCG-CGCGCATCGCCCGCCTGCTCCAGCCCC---GCGCCCGCATCGTCAATGGCGA 1272 Query 52133 CTTCACGAAAACCGCGATGCCGCGCGAGTTCTTCGACGCGGCGATCGGCAACCCGCCCTT 52192 ||| | ||||| | ||||| ||| || |||| |||||||||||| |||||||| Sbjct 1271 TTTCGCCCGAACCGAGCTGCCG-GCGCATT--TCGATCTGGCGATCGGCAATCCGCCCTT 1215 Query 52193 CGCGTCCG-TCGTCGTGACGAAT--GACCCCGAGTACAAGAAACAGGGGTTCATGCTGCA 52249 |||| ||| | | | |||| | ||| | || | |||||| Sbjct 1214 T---TCCGATCGCACGGTCCGTTCGGACCGGGCGTATCGCGGCCTCGGCCTGCGGCTGCA 1158 Query 52250 CGACTACTTCTTCGCCAAGACCATCGACCGCGTGAAGCCGGGCGGCATGCTCGTG---TT 52306 ||||| ||| ||| |||| | |||||||| |||| || ||||| ||||| | || Sbjct 1157 TGACTATTTCATCGTCAAGGCGATCGACCGGCTGAAACCCGGCGG---GCTCGCGGCTTT 1101 Query 52307 CGTCACCAGCAAGGGCACGATGGACAAGG-CGA-GCGACCGCGCACGCCGCTACCTCGCC 52364 ||||||| || || ||||||||||||| ||| | ||||||| | | | | | || Sbjct 1100 CGTCACCTCCAGCGGGACGATGGACAAGGCCGATCCAACCGCGCGGGAAACGATCGC-CC 1042 Query 52365 GACCGCGCGAACCTGATCGGCGCCATGCGGCTGCCGCAGACCGCGTTCAAGGACAACGCC 52424 ||| | ||| | || ||| |||||| || |||||| || | ||| || | | ||| Sbjct 1041 GACAGGCCGATCTTG-TCGCCGCCATCCGCCTGCCGGAGGGCAGCTTCCGGGCCGAGGCC 983 Query 52425 GGCACGGAAGTCGTGACCGACGTGCTGTTCCTCCAGAAGCGC 52466 |||||| | || ||| ||||| | || || ||| ||||||| Sbjct 982 GGCACGAACGTGGTGGCCGACATCCTCTTTTTCCGGAAGCGC 941 >seq12362 Length=960 Score = 86.0 bits (94), Expect = 3e-12 Identities = 125/176 (71%), Gaps = 3/176 (2%) Strand=Plus/Plus Query 9240 AGCGGCGAGTTCAAGGAAGTGACCGAGTGGCACCGCGTCGCTTTCTT---CGGCCGCCTC 9296 ||||| ||| | |||| |||||||||||||||||||| |||| || ||||| Sbjct 7 AGCGGGGAGCGCCGGGAAAAGACCGAGTGGCACCGCGTCGTCATCTTCAACGAGGGCCTC 66 Query 9297 GCCGAGATCGTCGACGAGCACCTTCGCAAGGGCGCATCGGTCTACATCGAGGGGCGCATC 9356 | || ||| ||| || ||| ||||||||| | |||||| ||||||| | | Sbjct 67 TGCAAGGTCGCCGAGCAGTTCCTGCGCAAGGGCTCGAAGGTCTATGTCGAGGGCCAGCTG 126 Query 9357 AAGACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGCTACACGACCGAGATCGT 9412 |||| || ||||| | || || ||||||| | |||||| |||||||| |||| Sbjct 127 CAGACCCGCGAGTGGGAAGACCAGAGCGGCCAGAAGCGCTACTCGACCGAGGTCGT 182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200523540194100