Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq11482 104 6e-18 seq8522 95.1 3e-15 seq16013 80.6 7e-11 >seq11482 Length=9116 Score = 104 bits (114), Expect = 6e-18 Identities = 117/154 (76%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 8878 GCGAAGGAACTCGACGTTCCGATCATCGCGCTGTCGCAGCTTAATCGAGGGCTCGAGAAT 8937 || ||||| |||| || ||||||||||||||||||||||| || | |||||| Sbjct 4589 GCCAAGGAGCTCGCGGTGCCGATCATCGCGCTGTCGCAGCTCTCCCGCCAGGTCGAGAGC 4530 Query 8938 CGCCCAAACAAGCGGCCCGTCA-TGTCCGATCTGCGCGAGTCGGGTGCGATCGAGCAGGA 8996 ||| ||||||| |||| | | |||| |||||||| ||||| ||||||||||||| Sbjct 4529 CGCGACGACAAGCG-CCCGCAACTCGCCGACCTGCGCGAATCGGGCTCGATCGAGCAGGA 4471 Query 8997 TGCCGACGTGATCCTCTTTATCTACCGCGATGAG 9030 |||||||| | | || ||||||||||| ||| Sbjct 4470 CGCCGACGTCGTGATGTTCATCTACCGCGACGAG 4437 >seq8522 Length=627 Score = 95.1 bits (104), Expect = 3e-15 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 8875 ATTGCGAAGGAACTCGACGTTCCGATCATCGCGCTGTCGCAGCTTAATCGAGGGCTCGAG 8934 || || ||||| |||| ||| ||| || | ||||| |||||||| || | | ||||| Sbjct 460 ATGGCCAAGGATCTCGGCGTGCCGGTCCTGGCGCTCTCGCAGCTGTCGCGCGAGGTCGAG 401 Query 8935 AATCGCCCAAACAAGCGGCCCGTCATGTCCGATCTGCGCGAGTCGGGTGCGATCGAGCAG 8994 || ||||| ||| |||||| |||| || ||| | |||||||| ||||||||||| Sbjct 400 AAGCGCCCCGACATACGGCCCCAGCTGTCGGACCTGAGGGAGTCGGGCTCGATCGAGCAG 341 Query 8995 GATGCCGACGTGATCCTCTTTATCTACCGCGA 9026 || ||||| ||| | | || ||||||| || Sbjct 340 GACGCCGATGTGGTGATATTCGTCTACCGGGA 309 >seq16013 Length=2360 Score = 80.6 bits (88), Expect = 7e-11 Identities = 109/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 8878 GCGAAGGAACTCGACGTTCCGATCATCGCGCTGTCGCAGCTTAATCGAGGGCTCGAGAAT 8937 || ||||| ||| || ||| | |||||||| ||||||||| || | | ||||| | Sbjct 2297 GCCAAGGAGCTCTCGGTGCCGGTGATCGCGCTCTCGCAGCTTTCGCGTGCGGTCGAGCAG 2238 Query 8938 CGCCCAAACAAGCGGCCCGTCATGTCCGATCTGCGCGAGTCGGGTGCGATCGAGCAGGAT 8997 ||| ||||||| || | | || || |||||||| ||||| ||||||||||||| Sbjct 2237 CGCGAGGACAAGCGCCCGATGCTCTCGGACCTGCGCGAATCGGGCTCGATCGAGCAGGAC 2178 Query 8998 GCCGACGTGATCCTCTTTATCTACCGCGATGA 9029 || ||| || | ||| |||| ||||| || Sbjct 2177 GCGGACATGGTGTGGTTTGTCTATCGCGACGA 2146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127521025550100