Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq11139 147 3e-30 seq9159 95.1 1e-14 >seq11139 Length=1709 Score = 147 bits (162), Expect = 3e-30 Identities = 279/403 (69%), Gaps = 12/403 (3%) Strand=Plus/Minus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 || ||||| || || ||||| || || || || || | ||| ||||| || ||| Sbjct 545 CGGTCGAAGCGGCCCGGGCGCAGCAGCGCCGGGTCGAGCACGTCGGGGCGGTTGGTGGCG 486 Query 11563 GCAATGACTACAATGCCAGTCTCATTG---TCGAAACCGTCCATTTCTGTGAGAAGCTGG 11619 || |||| | ||||| ||| ||| ||||| |||||||| || ||| |||||| Sbjct 485 GCGATGATGATGATGCC---CTCGTTGGCCTCGAAGCCGTCCATCTCGACGAGGAGCTGG 429 Query 11620 TTGATCGTCTGTTCACGCTCATCGTTGGAGG-GCATACCACCTG-CCGAACGCTTCTTAC 11677 |||| |||||| || ||||| ||||| ||| || | | | || ||| ||| | Sbjct 428 TTGAGCGTCTGCTCGCGCTCGTCGTTCGAGTTGCCGAGCCCGTGGCCG--CGCGAACGGC 371 Query 11678 CGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGA 11737 | || ||||| ||||| |||||||| ||||| || || ||| |||||||||| Sbjct 370 CCACGGCGTCGATCTCGTCGATGAAGACGATGCAGGGCGCGTTCTTCTTGGCCTGTTCGA 311 Query 11738 AAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAG 11797 | | || || ||||| | || || ||||| ||||||||||| ||||||| | | | | Sbjct 310 ACATGTCGCGCACACGGCTTGCGCCGACACCGACGAACATCTCGACGAAGTCCGAGCCGG 251 Query 11798 A-ACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTA 11856 | | |||| |||||| || | |||||| |||||||| || ||||| || ||||| Sbjct 250 AGATGGTGAA-GAAGGGCACGCCCGCCTCACCCGCGATGGCGCGGGCGAGCAGGGTCTTG 192 Query 11857 CCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCT 11899 || || || || | || | || || ||||| |||||||| Sbjct 191 CCGGTGCCGGGCGAGCCGACCAGCAGCGCGCCCTTGGGGATCT 149 >seq9159 Length=2836 Score = 95.1 bits (104), Expect = 1e-14 Identities = 79/97 (81%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 119528 GATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGAT 119587 |||||||||||| |||||| || |||||||| | || | ||||| ||||| ||||| Sbjct 1206 GATGAGCTCATTGCTGAAGGTGAGGCCAGGCATCAAGCCACGCTTCTTGAGCCAGAAGAT 1147 Query 119588 GGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACA 119624 |||||| || || || || |||||||||||||||||| Sbjct 1146 GGCACAGAAGCTGCCTGAGAAGAAGATGCCCTCCACA 1110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588856548305000