Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_015266.1 Length=40555 Score E Sequences producing significant alignments: (Bits) Value seq14319 131 4e-26 seq8309 129 2e-25 >seq14319 Length=508 Score = 131 bits (144), Expect = 4e-26 Identities = 332/493 (67%), Gaps = 18/493 (4%) Strand=Plus/Plus Query 29101 GCGACGCTGTACTTCCTAGGGACGAACTCGCGCACCGCGCAGTCGTATCACGGCAATCTG 29160 ||||| | |||||||| || |||||| | || || |||||| |||||||||||| | Sbjct 22 GCGACCATCTACTTCCTGGGCACGAACGCCCGGACGGCGCAGGGCTATCACGGCAATTTC 81 Query 29161 TACTTCGACGAATATTTCTGGG--TGCCGAAGTTCCGCGAGCTGAATACCGTTGCGTCGG 29218 ||||||||||| | |||||| | ||| |||| ||| ||||||| || || ||| Sbjct 82 TACTTCGACGAGTTCTTCTGGACCTTCCG--GTTCAACGACCTGAATAAGGTCGCCTCGA 139 Query 29219 GCATGGCGATGCACAAACGCTGGCGGCTGACCTA-CT-TCAGCACGCCGTCGAGTACGAC 29276 ||||| ||||| |||||| ||||| || || | | | | | || || Sbjct 140 TGATGGCCGCCCACAAGAAGTGGCGGAAAACCTATCTGTCGTCGCCCAGCAGCGT--GAT 197 Query 29277 CCATGAAGCCTACGCGTTCTGGAGCGGCGCCGATGCGAATCGTGGGCGCGCGCCTAGCGA 29336 || || ||||| | ||||||| ||||| | | ||| || |||| || ||| Sbjct 198 GCACGAGGCCTATGGCTTCTGGACCGGCGACAACTGGAACCGGCGGCGGCCGAAGGACGA 257 Query 29337 TCGTATCCAGA--TCGACACGAGCCACGAAGCGCTCGTG--CGAGGCATGCTGGGCGAGG 29392 | | | | ||||| ||||||| ||||| | || ||| ||| || | Sbjct 258 --GAAGCGGGTCTTCGACGTCAGCCACGCGGCGCTGAAGAACGGGGC--GCTCGGGCCCG 313 Query 29393 ACGAGCAGTGGCGTCAGATCGTCACCGTACTCGATGCGATCGAGGGCGGCTGCGACTTGT 29452 || || | || || | | || | |||||| | |||||| |||||| | | Sbjct 314 ACAAGATCTTCCGGCATGTGCTGACGATCGAGGATGCGGAGGCGGGCGGTTGCGACCTCT 373 Query 29453 TCGACCTGGA-GAGACTTCGGCGCCGGTACAGTGCAGAGGCTTTCGCGAACCTGCTGATG 29511 ||||| | || ||| || || | |||| | | || | ||||| |||||||||||| Sbjct 374 TCGACATCGACGAG-CTGCGCCAGGAGTACGGGCCGGACGAGTTCGCCAACCTGCTGATG 432 Query 29512 TGCCAGTTCATCGACGATTCGGTGTCGGTGTTCAAGCTGGCCGAGCTGCAGCGCTGCATG 29571 |||||||||||||||||| || |||||||||| |||||| |||||||| ||||||| Sbjct 433 TGCCAGTTCATCGACGATGCGCAGTCGGTGTTCCCGCTGGCGATGCTGCAGCCCTGCATG 492 Query 29572 GTCGACTCGTGGG 29584 |||| || |||| Sbjct 493 ATCGATTCCTGGG 505 >seq8309 Length=800 Score = 129 bits (142), Expect = 2e-25 Identities = 260/380 (68%), Gaps = 8/380 (2%) Strand=Plus/Minus Query 14300 GGCGGAACCACGCGTTGATGTTCTCGATGATGTcgcgcgcgcgcgACGGGTTGAGCGGGC 14359 |||||||| ||||||||| ||||||||||||||||||| | || | ||||| Sbjct 737 GGCGGAACTTGGCGTTGATGGTCTCGATGATGTCGCGCGCCAGGCTGGGCGTCAGCGGCT 678 Query 14360 CGTCGACGACGCCCATCTGTTCCTCGGCGATCGTGTCAGCGATCACCTGTGCCGAACGCG 14419 |||||| | | |||| |||||||||| ||||| || | | || | || | Sbjct 677 TGTCGACCGCCCACATCATGCCCTCGGCGATGGTGTCCTTGAGGATGTCGGCGGTGCGGG 618 Query 14420 TGTAGTTCTCGAAGAAGAACTTGCCGTCCGCGTC---GCACGTGCGCGAGCCCCAGAAAC 14476 | | | ||||| ||| |||| | |||| ||| || | ||||||||| | Sbjct 617 CGGCGCTTTCGAACTGGAAG--GCCGGCT-CGTCAGAGCAGGTCTGGTTGCCCCAGAAGC 561 Query 14477 GGAAGCCGTTTCGGTTGACGAGCGTGGTGACCTGGTTCTCGTTCAGATAGCCGGCGTCCG 14536 |||||||||| || || |||| |||||| | ||||||| ||||||||| | Sbjct 560 GGAAGCCGTTCTGGCGGATCAGCGCGGTGACGCCGGCGGCGTTCAGGACGCCGGCGTCGG 501 Query 14537 TTGCCGGGTCTTGCAAATCCCACGACA-CGTCCGCGCTGATGCCGGTCACGCCGTTGACG 14595 | | ||||| |||| | | | | | || | | | |||| ||||||||||| Sbjct 500 TCGAGGGGTCCTGCAGGGCGAAGCTGATCTTGCGGG-TCAGGCCGACGACGCCGTTGACC 442 Query 14596 ACGACGTTCGACAGCGTCTTGTGCCAGCCGATGTCGTTGTCGATCTTCGCGCGCAGGCCC 14655 ||||||| || | ||||||||||||||||| || | ||||| ||| ||||||||||| Sbjct 441 GCGACGTTGGAGATCGTCTTGTGCCAGCCGACTTCCTCGTCGAGCTTGGCGCGCAGGCCG 382 Query 14656 GCCGCGATCGCCGGCGCCGG 14675 | |||| ||||| ||||| Sbjct 381 ACGGCGACCGCCGCGGCCGG 362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129629419243650