Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_015282.1 Length=174079 Score E Sequences producing significant alignments: (Bits) Value seq14742 527 7e-145 >seq14742 Length=52551 Score = 527 bits (584), Expect = 7e-145 Identities = 733/1019 (72%), Gaps = 6/1019 (1%) Strand=Plus/Plus Query 165191 TGGTTCGATGTCCTCGATGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGTTGGTCT 165250 ||||| |||| | ||||||||| | | ||| ||||| || ||||| |||||||| Sbjct 37759 TGGTTTGATGACGCAGATGACTGGTTACGTCAAGACCGTTTTGTATTTGTAGGTTGGTCA 37818 Query 165251 GGACTTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACT 165310 || ||||||||||| || ||||||| |||| |||| |||||| ||||||| || ||| Sbjct 37819 GGTCTTCTTCTTTTCCCTTGTGCTTATTTTGCACTTGGAGGTTGGTTTACTGGTACAACT 37878 Query 165311 TTCGCGACGAGTTGGTATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGTGCAAACTTT 165370 || | || ||||| || || || || || ||| ||| | || ||| ||||| Sbjct 37879 TTTGTAACATCATGGTACACACATGGTTTAGCTTCTTCATATTTAGAAGGTTGTAACTTC 37938 Query 165371 CTTACTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTC-TCTG 165429 | || || || ||||| ||||| ||| || ||||| ||| ||| || | ||| | || Sbjct 37939 TTAACAGCAGCTGTTTCAACTCCTGCAAACAGTATGGCTCACTCT-TTATTATTCTTATG 37997 Query 165430 GGGTCCTGAGGCTCAAGGGGA-TTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGGCTT 165488 ||| ||||| || ||||| || ||| || | ||| ||| | || || || ||| | | Sbjct 37998 GGGACCTGAAGCACAAGGTGACTTTACTC-GTTGGTGTCAATTAGGTGGTCTATGGACAT 38056 Query 165489 TTGTGGCGCTCCACGGGGCTTTCGCTCTAATTGGTTTCATGCTTCGTCAGTTTGAATTAG 165548 || | || | || || |||||| | ||||||| || ||| | ||||| |||||| | | Sbjct 38057 TTATTGCTTTACATGGATCTTTCGGTTTAATTGGATTTATGTTACGTCAATTTGAAATTG 38116 Query 165549 CACGTCTCA-TCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTT 165607 | ||| ||| | | | ||||| |||||||||||||| ||||| | ||||| | ||| Sbjct 38117 CTCGT-TCAGTTAATTTACGTCCATACAATGCTATTGCTTTCTCGGCGCCTATTTCAGTT 38175 Query 165608 TTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCT 165667 |||||| || || | || ||||| | || ||||| | |||||||| ||||| | Sbjct 38176 TTTGTTTCAGTTTTCTTAATTTACCCATTAGGACAATCTGGCTGGTTTTTTGCTCCTAGT 38235 Query 165668 TTCGGGGTCGCAGCAATCTTCAGGTTCCTTCTCTTCCTACAAGGATTCCATAACTGGACC 165727 || || || ||||| || ||| | ||| || | || | ||||| |||||||||||||| Sbjct 38236 TTTGGTGTAGCAGCTATTTTCCGTTTCATTTTATTTTTCCAAGGCTTCCATAACTGGACT 38295 Query 165728 TTGAATCCCTTTCATATGATGGGTGTTGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCC 165787 || || || || || ||||||||||| |||||| | | || | ||| | | | ||| Sbjct 38296 TTAAACCCATTCCACATGATGGGTGTAGCAGGTGTTTTAGGAGCTGCTCTATTATGTGCT 38355 Query 165788 ATCCATGGTGTTACAGTAGAGAATACTCTGTATCAAGATGGTGACGATGCAAATACTTTC 165847 || || |||| ||| || || || || | | | |||||||||||| ||| || || ||| Sbjct 38356 ATTCACGGTGCTACTGTTGAAAACACATTATTTGAAGATGGTGACGGTGCTAACACATTC 38415 Query 165848 AAGGCATTTGACTCTACTCAAGAGGAAGAAACCTACTCAATGGTTACTGCAAACCGTTTC 165907 |||||| || | || |||| |||||||| ||||||||||| || || ||||||||| Sbjct 38416 CGTGCATTTAACCCAACACAAGCTGAAGAAACTTACTCAATGGTAACAGCGAACCGTTTC 38475 Query 165908 TGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTATGCTG 165967 |||||||| || || || |||| || ||||| | ||| | || ||||| ||||| Sbjct 38476 TGGTCTCAAATTTTTGGGGTTGCTTTCTCAAATAAACGTTGGCTTCACTTCTTCATGCTT 38535 Query 165968 TTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAAC 166027 ||||||||||| | |||||||||| | || ||| | |||| | ||| | || Sbjct 38536 CTTGTTCCTGTTGTAGGTCTTTGGATGTCAGCTATTGGTGTAGTTGGGTTAGCTTTAAAT 38595 Query 166028 CTTCGTGCTTATGACTTTGTATCCCAAGAGATCAGAGCAGCAGAAGACCCAGAGTTTGAA 166087 | |||||||||||||| || || ||||| || | ||||| || || || || || ||| Sbjct 38596 TTACGTGCTTATGACTTCGTTTCACAAGAAATTCGTGCAGCTGAGGATCCGGAATTCGAA 38655 Query 166088 ACCTTCTACACGAAAAACATTCTCTTGAATGAAGGTCTTCGTGCTTGGTTGGCACCAGTC 166147 || |||||||| ||||| ||| | || ||||||||| | ||||||||| |||| | Sbjct 38656 ACTTTCTACACAAAAAATATTATTTTAAATGAAGGTATCCGTGCTTGGATGGCTGCGCAA 38715 Query 166148 GATCAACCGCATGAGAACTTTGTCTTCCCTGAAGAAGTTCTGCCTAGGGGTAACGCGCT 166206 || ||||| ||||| |||| |||||||||||||| | ||| | ||||| || || Sbjct 38716 GACCAACCACATGAACGTCTTGTATTCCCTGAAGAAGTATTACCTCGTGGTAATGCTCT 38774 Score = 322 bits (356), Expect = 5e-83 Identities = 280/348 (80%), Gaps = 0/348 (0%) Strand=Plus/Minus Query 164289 GTGTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGGC 164348 || |||||||| ||||||||||| || |||||||| ||||| ||| | || |||||||| Sbjct 9281 GTTTTCCAAGCTGAGCACAACATTCTTATGCACCCATTCCACATGTTAGGTGTTGCTGGT 9222 Query 164349 GTATTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTT 164408 |||||||| ||||| | ||| ||||||||||||||| | || ||||| || | | Sbjct 9221 GTATTTGGTGGTTCATTATTCTCTGCAATGCACGGTTCATTAGTAACTTCATCTTTAATC 9162 Query 164409 CGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAA 164468 |||||||| || |||| || || ||| | || ||||| || ||||||||||||||| Sbjct 9161 CGTGAAACTACTGAAAACGAATCTGCTAACGAAGGATACAAATTCGGTCAAGAAGAAGAA 9102 Query 164469 ACATACAACATTGTTGCCGCTCACGGTTACTTTGGTCGTCTGATCTTCCAATACGCTTCA 164528 |||||||||||||| || || || ||||||||||| ||| | ||||||||||||||||| Sbjct 9101 ACATACAACATTGTAGCTGCACATGGTTACTTTGGACGTTTAATCTTCCAATACGCTTCT 9042 Query 164529 TTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGCATCTGG 164588 ||||||||||| ||||| || ||||||||| | ||||| ||||| || ||||| || ||| Sbjct 9041 TTCAACAACTCTCGTTCATTACACTTCTTCTTAGCTGCTTGGCCAGTAGTTGGTATTTGG 8982 Query 164589 TTCACCGCACTTGGTGTTTCCACGATGGCATTCAACCTGAACGGTTTC 164636 ||||| || | ||| |||| || |||||||||||| | ||||| ||| Sbjct 8981 TTCACTGCTTTAGGTATTTCAACTATGGCATTCAACTTAAACGGATTC 8934 Score = 271 bits (300), Expect = 8e-68 Identities = 287/373 (77%), Gaps = 4/373 (1%) Strand=Plus/Minus Query 163785 TTCTGCGAATGGGTGACTTCCACAAACAACCGCCTCTATGTTGGTTGGTTCGGCGTTCTG 163844 || || |||||| | ||| || | ||||| | || | ||||||||||| ||| | Sbjct 12271 TTTTGTGAATGGATTACTAGTACTGAAAACCGTTTATACATCGGTTGGTTCGGTGTTATC 12212 Query 163845 ATGATCCCTACGCTGCTTGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 163903 ||||||||||| | | |||| || ||||| |||||| |||| ||| ||||||| || Sbjct 12211 ATGATCCCTACATTATTAACAGCTACT-TCTGTATTCATCATCGCTTTCATCGCTGCACC 12153 Query 163904 CCCTGTGGACATCGATGGTATTCGTGAACCTGTTGCAGGTTCGCTCATGTATGGTAACAA 163963 || || || ||||||||||||||||| || ||| | ||||| | | || || ||||| Sbjct 12152 TCCAGTTGATATCGATGGTATTCGTGAGCCAGTTTCTGGTTCATTATTATACGGAAACAA 12093 Query 163964 CATCATCTCTGGTGCAGTTGTTCCCTCGTCCAATGCAATTGGTCTTCACTTCTACCCCAT 164023 ||||||||||||||| |||||||| | || || || |||||| | || |||||||| || Sbjct 12092 CATCATCTCTGGTGCTGTTGTTCCTACATCAAACGCTATTGGTTTACATTTCTACCCAAT 12033 Query 164024 TTGGGAAGCCGCATCCCTTGATGAATGGCTTTACAACGGTGGTCCTTTCCAACTTGTCGT 164083 ||||||||| |||| | ||||| ||| | |||||||||||||||| |||| | |||| Sbjct 12032 TTGGGAAGCTTCATCTTTAGATGAGTGGTTATACAACGGTGGTCCTTACCAATTAATCGT 11973 Query 164084 CTTCCACTTCCTGATCGGTATCTA-TGCATACATGGGTCGTGAGTGGGAACTGTCTTACC 164142 | ||||||| | | ||||| | ||| |||||||||||||| |||||| | ||||||| Sbjct 11972 TTGCCACTTCTTCTTAGGTATTTGCTGC-TACATGGGTCGTGAATGGGAATTATCTTACC 11914 Query 164143 GTCTTGGTATGCG 164155 || | |||||||| Sbjct 11913 GTTTAGGTATGCG 11901 Score = 127 bits (140), Expect = 2e-24 Identities = 109/135 (81%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 164151 ATGCGTCCTTGGATTTGTGTTGCTTACTCTGCACCCGTTGCAGCAGCATCCGCAGTCTTC 164210 ||||||||||||||| ||| ||||||||||| || |||||||| || | ||||| ||| Sbjct 10477 ATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCAGTTGCAGCTGCTACTGCAGTATTC 10418 Query 164211 CTGGTCTATCCTTTCGGTCAAGGTTCGTTCTCTGACGCAATGCCCCTGGGCATCTCTGGC 164270 | |||||||| |||| |||||||| |||||||| | ||||| | || |||||||| Sbjct 10417 ATCATCTATCCTATCGGACAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTATCTCTGGA 10358 Query 164271 ACCTTCAACTACATG 164285 || ||||||| |||| Sbjct 10357 ACTTTCAACTTCATG 10343 Score = 111 bits (122), Expect = 2e-19 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 164635 TCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGACG 164694 ||||||||||||| || | | || ||| |||||||| | ||||||||||||||| Sbjct 8285 TCAACTTCAACCAATCAGTAGTTGACTCTCAAGGTCGTGTATTAAACACTTGGGCAGACA 8226 Query 164695 TTCTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAACGCTCACAACTTCC 164754 | ||||||| ||| | |||||||||||||||||||||||||| || |||||||||| Sbjct 8225 TCATCAACCGTGCTAACTTAGGTATGGAAGTTATGCACGAGCGTAATGCGCACAACTTCC 8166 Query 164755 C 164755 | Sbjct 8165 C 8165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556811848689000